RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 HERPUD1Q15011 391 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 TMEM176BQ3YBM2 270 aaPredicted RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 NKAIN1Q4KMZ8 207 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 PHF19Q5T6S3 580 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2T2Q6IF00 324 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC25A24Q6NUK1 477 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 TEX38Q6PEX7 206 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 C11orf88Q6PI97 169 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 GALNTL5Q7Z4T8 443 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC35E3Q7Z769 313 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 THOC6Q86W42 341 aaKnown RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 CATSPERDQ86XM0 798 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF280BQ86YH2 543 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 THNSL2Q86YJ6 484 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF595Q8IYB9 648 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 GCNT2Q8N0V5 402 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 POC1AQ8NBT0 407 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 OR8G5Q8NG78 346 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 OR4S1Q8NGB4 309 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 OR10G4Q8NGN3 311 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 SFXN5Q8TD22 340 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 ORAOV1Q8WV07 137 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 ING5Q8WYH8 240 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 SEH1LQ96EE3 360 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 C5orf34Q96MH7 638 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 ALKBH3Q96Q83 286 aaPredicted RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 YPEL2Q96QA6 119 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 LMF1Q96S06 567 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 MYADMQ96S97 322 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 URM1Q9BTM9 101 aaKnown RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 MED10Q9BTT4 135 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 GPR174Q9BXC1 333 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 TEX12Q9BXU0 123 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 COMMD4Q9H0A8 199 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2AG1Q9H205 316 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 GPR173Q9NS66 373 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 FAM212BQ9NTI7 297 aaPredicted RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 POT1Q9NUX5 634 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 H2AFY2Q9P0M6 372 aaPredicted RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 TAAR2Q9P1P5 351 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 GRHPRQ9UBQ7 328 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 SERTAD3Q9UJW9 196 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 IKZF2Q9UKS7 526 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF346Q9UL40 294 aaKnown RBP4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 VSIG4Q9Y279 399 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 CSAG2Q9Y5P2 127 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 TRPM7Q96QT4 1865 aa4.73□□□□□ -1.65
LSM3P2-201ENST00000551246 A0A0A6YYH2 397 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 TSPAN11A1L157 253 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 A6NJ64 397 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 B4E171 279 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 UMAD1C9J7I0 102 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 J3QLW9 94 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 RAB27BO00194 218 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 DCTN6O00399 190 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PTGESO14684 152 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 HSPA12AO43301 675 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SOX15O60248 233 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF217O75362 1048 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 TSPAN15O95858 294 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CD160O95971 181 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 RPN2P04844 631 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2T7P0C7T2 308 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SEC11BP0C7V7 166 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR5H8P0DN80 308 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 GTF2F2P13984 249 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 IRF2P14316 349 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 FABP4P15090 132 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF19P17023 458 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CXCR1P25024 350 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CD82P27701 267 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 HOXC8P31273 242 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CCKARP32238 428 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PYCR1P32322 319 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PRSS3P35030 304 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SERPINF1P36955 418 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 THPOP40225 353 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 GATMP50440 423 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CCL23P55773 120 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC37A1P57057 533 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CARD18P57730 90 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 BTG2P78543 158 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 MC1RQ01726 317 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 IRF8Q02556 426 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ST3GAL3Q11203 375 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PPP1R1AQ13522 171 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 RUNX2Q13950 521 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CRMP1Q14194 572 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF235Q14590 738 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 MAJINQ3KP22 176 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 TM4SF20Q53R12 229 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF311Q5JNZ3 666 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PLEKHS1Q5SXH7 462 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 AKR1C8PQ5T2L2 129 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 NCR3LG1Q68D85 454 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR8G2PQ6IF36 304 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF585AQ6P3V2 769 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 DEGS2Q6QHC5 323 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms