RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ENPP4Q9Y6X5 453 aa10.74□□□□□ -0.69
PTCH1-221ENST00000550914 CRABP1P29762 137 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 LIPEQ05469 1076 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 DNM1P34Q6PK57 102 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 DPY19L2P2Q6ZN68 376 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 DCDC5Q6ZRR9 648 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 MOGAT3Q86VF5 341 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 SLC15A3Q8IY34 581 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 Q8TCH9 128 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 RCN3Q96D15 328 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 HSH2DQ96JZ2 352 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 NUDT16L1Q9BRJ7 211 aaKnown RBP10.73□□□□□ -0.69
PTCH1-221ENST00000550914 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 NUAK2Q9H093 628 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 RERGLQ9H628 205 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 NOX4Q9NPH5 578 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 TMEM100Q9NV29 134 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 CLN8Q9UBY8 286 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 POLR1DQ9Y2S0 133 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
PTCH1-221ENST00000550914 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 F5H5P2 479 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 H0YL77 283 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 NDUFAB1O14561 156 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 GSTA4O15217 222 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF205O95201 554 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 GPANK1O95872 356 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 H1F0P07305 194 aaKnown RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 IRF2P14316 349 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 MDKP21741 143 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 FPR3P25089 353 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 NPY4RP50391 375 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 RPS6KA3P51812 740 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 DEFA6Q01524 100 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 COX10Q12887 443 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 ECH1Q13011 328 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 KRTAP27-1Q3LI81 207 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 WDR25Q64LD2 544 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 PTCHD4Q6ZW05 846 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 SPATC1Q76KD6 591 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 FITM2Q8N6M3 262 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 OR10S1Q8NGN2 331 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 RP9Q8TA86 221 aaKnown RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 FAM46AQ96IP4 442 aaKnown RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 RSRC1Q96IZ7 334 aaKnown RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 KRCC1Q9NPI7 259 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 NOP16Q9Y3C1 178 aaKnown RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 IER3IP1Q9Y5U9 82 aa10.72□□□□□ -0.69
PTCH1-221ENST00000550914 PRKDCP78527 4128 aaKnown RBP10.72□□□□□ -0.69
PTCH1-221ENST00000550914 IGHV3OR16-10A0A075B7F0 116 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 SOCS2O14508 198 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 HOXA3O43365 443 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 ENSAO43768 121 aaKnown RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 SERPINA1P01009 418 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 RHCEP18577 417 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 PSMB10P40306 273 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 PMELP40967 661 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 CD200P41217 278 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 CDKN2AP42771 156 aaKnown RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 OMPP47874 163 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 FXYD6P3P58550 94 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 KCNJ8Q15842 424 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 GPR157Q5UAW9 335 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 TSEN54Q7Z6J9 526 aaKnown RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 BHLHE23Q8NDY6 225 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 OR11L1Q8NGX0 322 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 OR4F5Q8NH21 305 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 SLC22A4Q9H015 551 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 BEX1Q9HBH7 125 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 KIF17Q9P2E2 1029 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 RPS6KA6Q9UK32 745 aa10.71□□□□□ -0.69
PTCH1-221ENST00000550914 FAM32AQ9Y421 112 aaKnown RBP10.71□□□□□ -0.69
PTCH1-221ENST00000550914 IGLV1-36A0A0B4J1U3 117 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 FAM181BA6NEQ2 426 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 UNC119BA6NIH7 251 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 DCTN6O00399 190 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 NME4O00746 187 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 IMPA2O14732 288 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 NDUFA7O95182 113 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 PPP1R3DO95685 299 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 KNG1P01042 644 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 LIPFP07098 398 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 GSK3BP49841 420 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 SLC7A2P52569 658 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 RAD23AP54725 363 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 FGF12P61328 243 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 MALLQ13021 153 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 GK2Q14410 553 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-221ENST00000550914 SLC36A3Q495N2 470 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 OTPQ5XKR4 325 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms