RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 C1orf147Q96MC9 270 aaPredicted RBP19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 SLC30A2Q9BRI3 323 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 TMEM246Q9BRR3 403 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 CDADC1Q9BWV3 514 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 NOP16Q9Y3C1 178 aaKnown RBP19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 IGHV3OR16-10A0A075B7F0 116 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 KIR2DS1A0A191URI9 304 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 A0A1W2PRQ8 180 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 KCNAB3O43448 404 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 ZNF205O95201 554 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 IGHV4-38-2P0DP08 117 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 FPR3P25089 353 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 PITPNBP48739 271 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 MALLQ13021 153 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 DGCR6Q14129 220 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 ZNF404Q494X3 552 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 GPR157Q5UAW9 335 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 SPATC1Q76KD6 591 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 BHLHE23Q8NDY6 225 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 NUDT16L1Q9BRJ7 211 aaKnown RBP19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 EFCAB1Q9HAE3 211 aa19.31■□□□□ 0.68
SMARCD1-209ENST00000550477 TRAV40A0A0B4J280 105 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 F5H5P2 479 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 GMNNO75496 209 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 PLATP00750 562 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 ZNF26P17031 533 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 RAD23AP54725 363 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 ECH1Q13011 328 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 KCNJ8Q15842 424 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 SLC36A3Q495N2 470 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 ZNF362Q5T0B9 420 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 JAZF1Q86VZ6 243 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 POU5F2Q8N7G0 328 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 CELF2-AS1Q8N7Q2 184 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 OR2AJ1Q8NGZ0 328 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 TMIGD2Q96BF3 282 aa19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 RSRC1Q96IZ7 334 aaKnown RBP19.3■□□□□ 0.68
SMARCD1-209ENST00000550477 UNC119BA6NIH7 251 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 H0YL77 283 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 PHYHO14832 338 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 RENP00797 406 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 RHCEP18577 417 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 RBMXP38159 391 aaKnown RBP19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 NPY4RP50391 375 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 SLC7A2P52569 658 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 PAX2Q02962 417 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 CD276Q5ZPR3 534 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 DCDC5Q6ZRR9 648 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 OR10S1Q8NGN2 331 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 KCTD14Q9BQ13 255 aaPredicted RBP19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 SLC22A4Q9H015 551 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 ARMCX1Q9P291 453 aa19.29■□□□□ 0.68
SMARCD1-209ENST00000550477 CCDC22O60826 627 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 TXNDC12O95881 172 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 GATA4P43694 442 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 SMIM11AP58511 58 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 COX10Q12887 443 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 OTPQ5XKR4 325 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 SMARCD3Q6STE5 483 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 ERMAPQ96PL5 475 aaPredicted RBP19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 PITX2Q99697 317 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 BEX1Q9HBH7 125 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 SRA1Q9HD15 236 aaKnown RBP19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 NOX4Q9NPH5 578 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 MMP24Q9Y5R2 645 aa19.28■□□□□ 0.68
SMARCD1-209ENST00000550477 IGHV3-64DA0A0J9YX35 117 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 IMPA2O14732 288 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 MLNRO43193 412 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 ENSAO43768 121 aaKnown RBP19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 KNG1P01042 644 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 LIPFP07098 398 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 COX4I1P13073 169 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 MDH1P40925 334 aaKnown RBP19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 CDKN2AP42771 156 aaKnown RBP19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 OMPP47874 163 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 HIST1H3AP68431 136 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 HIST2H3PS2Q5TEC6 136 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 C17orf107Q6ZR85 190 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 PTCHD4Q6ZW05 846 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 HIST2H3AQ71DI3 136 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 SPRYD4Q8WW59 207 aaPredicted RBP19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 TRIM36Q9NQ86 728 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 ERVK-18Q9QC07 812 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 B9D1Q9UPM9 204 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 SAMD4AQ9UPU9 718 aaKnown RBP19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 LHFPL6Q9Y693 200 aa19.27■□□□□ 0.68
SMARCD1-209ENST00000550477 F5H5K5 113 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 NME4O00746 187 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 HOXA3O43365 443 aaPredicted RBP19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 HLA-DQA2P01906 255 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 LCATP04180 440 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 HLA-DPB1P04440 258 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 NOS3P29474 1203 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 GSK3BP49841 420 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 TPTEP56180 551 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 WDR25Q64LD2 544 aaPredicted RBP19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 CORO6Q6QEF8 472 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 PGAP1Q75T13 922 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 OR4F5Q8NH21 305 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms