RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 LOC100130705A0A1B0GUX0 176 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 SLC22A31A6NKX4 558 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 CASQ2O14958 399 aaPredicted RBP19.29■□□□□ 0.68
BRF1-216ENST00000550208 IGHV3-13P01766 116 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 ALOX5APP20292 161 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 OGFRL1Q5TC84 451 aaPredicted RBP19.29■□□□□ 0.68
BRF1-216ENST00000550208 PRSS57Q6UWY2 283 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 COLCA1Q6ZS62 124 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 ZNF454Q8N9F8 522 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 IPCEF1Q8WWN9 437 aaPredicted RBP19.29■□□□□ 0.68
BRF1-216ENST00000550208 APOBEC3DQ96AK3 386 aaPredicted RBP19.29■□□□□ 0.68
BRF1-216ENST00000550208 CMBLQ96DG6 245 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 SORCS2Q96PQ0 1159 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 KCNJ15Q99712 375 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 YIPF3Q9GZM5 350 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 SMPD3Q9NY59 655 aaPredicted RBP19.29■□□□□ 0.68
BRF1-216ENST00000550208 PTTG3PQ9NZH4 202 aa19.29■□□□□ 0.68
BRF1-216ENST00000550208 FBXO9Q9UK97 447 aaPredicted RBP19.29■□□□□ 0.68
BRF1-216ENST00000550208 ZNF878C9JN71 531 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 M0R135 149 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 SSX4O60224 188 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 LCATP04180 440 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 LYNP07948 512 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 NAT2P11245 290 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 TUBG1P23258 451 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 NUDT6P53370 316 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 SNRPGP62308 76 aaKnown RBP19.28■□□□□ 0.68
BRF1-216ENST00000550208 PSG7Q13046 419 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 GGTLC2Q14390 218 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 SPNS3Q6ZMD2 512 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 PACRGLQ8N7B6 248 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 OR5L1Q8NGL2 311 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 ZNF799Q96GE5 643 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 TUBG2Q9NRH3 451 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 SLCO1C1Q9NYB5 712 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 HAO2Q9NYQ3 351 aa19.28■□□□□ 0.68
BRF1-216ENST00000550208 WARS2Q9UGM6 360 aaKnown RBP19.28■□□□□ 0.68
BRF1-216ENST00000550208 M0R233 179 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 SLC16A6O15403 523 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 ENTPD6O75354 484 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 LY6HO94772 140 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 F12P00748 615 aaPredicted RBP19.27■□□□□ 0.68
BRF1-216ENST00000550208 HTR1FP30939 366 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 OTX1P32242 354 aaPredicted RBP19.27■□□□□ 0.68
BRF1-216ENST00000550208 EFNA4P52798 201 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 SLC34A1Q06495 639 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 HLXQ14774 488 aaPredicted RBP19.27■□□□□ 0.68
BRF1-216ENST00000550208 NKPD1Q17RQ9 610 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 COG8Q96MW5 612 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 RDH12Q96NR8 316 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 CNN2Q99439 309 aaKnown RBP19.27■□□□□ 0.68
BRF1-216ENST00000550208 RAB1BQ9H0U4 201 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 TPK1Q9H3S4 243 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 MS4A5Q9H3V2 200 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 BARX1Q9HBU1 254 aaPredicted RBP19.27■□□□□ 0.68
BRF1-216ENST00000550208 ADGRL4Q9HBW9 690 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 C8orf4Q9NR00 106 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 LAMP5Q9UJQ1 280 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 COPS3Q9UNS2 423 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 N6AMT1Q9Y5N5 214 aa19.27■□□□□ 0.68
BRF1-216ENST00000550208 C5orf63A6NC05 138 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 H3BSA7 217 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 J3QW42 95 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 H2BFMP0C1H6 154 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 SLC2A1P11166 492 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 ANOS1P23352 680 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 OPRL1P41146 370 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 SLC15A1P46059 708 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 SLC6A9P48067 706 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 GRB2P62993 217 aaKnown RBP19.26■□□□□ 0.67
BRF1-216ENST00000550208 MOGQ16653 247 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 SLC25A30Q5SVS4 291 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 DRAM2Q6UX65 266 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 ZNF771Q7L3S4 317 aaPredicted RBP19.26■□□□□ 0.67
BRF1-216ENST00000550208 ZNF283Q8N7M2 679 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 ZNF555Q8NEP9 628 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 GTF3AQ92664 365 aaKnown RBP19.26■□□□□ 0.67
BRF1-216ENST00000550208 HAVCR1Q96D42 359 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 GPR160Q9UJ42 338 aa19.26■□□□□ 0.67
BRF1-216ENST00000550208 SBK2P0C263 348 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 GABRB1P18505 474 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 OCLNQ16625 522 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 CLEC12BQ2HXU8 276 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 RHOUQ7L0Q8 258 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 TGIF2LYQ8IUE0 185 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.25■□□□□ 0.67
BRF1-216ENST00000550208 SLC35F2Q8IXU6 374 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 ENTHD1Q8IYW4 607 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 OR51G2Q8NGK0 314 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 RHOXF1Q8NHV9 184 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 Q96MF0 132 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 RNPEPL1Q9HAU8 725 aa19.25■□□□□ 0.67
BRF1-216ENST00000550208 PURGQ9UJV8 347 aaKnown RBP19.25■□□□□ 0.67
BRF1-216ENST00000550208 MAP1AP78559 2803 aaPredicted RBP19.24■□□□□ 0.67
BRF1-216ENST00000550208 PRR32B1ATL7 298 aa19.24■□□□□ 0.67
BRF1-216ENST00000550208 H0YHG0 523 aa19.24■□□□□ 0.67
BRF1-216ENST00000550208 APOL3O95236 402 aa19.24■□□□□ 0.67
BRF1-216ENST00000550208 HSD11B1P28845 292 aa19.24■□□□□ 0.67
BRF1-216ENST00000550208 CX3CR1P49238 355 aa19.24■□□□□ 0.67
BRF1-216ENST00000550208 SNAI3Q3KNW1 292 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms