RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.29□□□□□ -0.6
GCN1-206ENST00000549815 JAZF1Q86VZ6 243 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 LINC00346Q8IVM7 164 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 SPICQ8N5J4 248 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 SDR9C7Q8NEX9 313 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 DVL3Q92997 716 aaPredicted RBP11.29□□□□□ -0.6
GCN1-206ENST00000549815 MCUR1Q96AQ8 359 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 MEGF10Q96KG7 1140 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 SLC6A7Q99884 636 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 SLC30A2Q9BRI3 323 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 IFT27Q9BW83 186 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 FN3KQ9H479 309 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 ESM1Q9NQ30 184 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 RPRD1BQ9NQG5 326 aaKnown RBP11.29□□□□□ -0.6
GCN1-206ENST00000549815 MRPL22Q9NWU5 206 aaKnown RBP11.29□□□□□ -0.6
GCN1-206ENST00000549815 CYB5R1Q9UHQ9 305 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 PPP1R3CQ9UQK1 317 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 POLR1DQ9Y2S0 133 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 TMEM89A2RUT3 159 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 IDH3BO43837 385 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ACSM4P0C7M7 580 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ZNF12P17014 697 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ZNF362Q5T0B9 420 aaPredicted RBP11.28□□□□□ -0.6
GCN1-206ENST00000549815 SLC27A4Q6P1M0 643 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 NAA40Q86UY6 237 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ZDHHC21Q8IVQ6 265 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 KLHL36Q8N4N3 616 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ZDHHC22Q8N966 263 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 OR10AD1Q8NGE0 317 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 ZNF420Q8TAQ5 688 aaPredicted RBP11.28□□□□□ -0.6
GCN1-206ENST00000549815 GNPDA2Q8TDQ7 276 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
GCN1-206ENST00000549815 CEACAM18A8MTB9 384 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 TRIM77I1YAP6 450 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 IFNL4K9M1U5 179 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 BHLHE40O14503 412 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 WNT2P09544 360 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 CFPP27918 469 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 IFNGR2P38484 337 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 MDH2P40926 338 aaKnown RBP11.27□□□□□ -0.61
GCN1-206ENST00000549815 PMELP40967 661 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 MAGEA2P43356 314 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 GYS2P54840 703 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 PAX2Q02962 417 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.27□□□□□ -0.61
GCN1-206ENST00000549815 ZNF154Q13106 437 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 ZNF181Q2M3W8 571 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 SLC36A3Q495N2 470 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 SPATS1Q496A3 300 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 KLF17Q5JT82 389 aaPredicted RBP11.27□□□□□ -0.61
GCN1-206ENST00000549815 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
GCN1-206ENST00000549815 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 OR52E2Q8NGJ4 325 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 OR4C15Q8NGM1 316 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 OR13G1Q8NGZ3 307 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 POP5Q969H6 163 aaKnown RBP11.27□□□□□ -0.61
GCN1-206ENST00000549815 MAP6Q96JE9 813 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 ZNF582Q96NG8 517 aaPredicted RBP11.27□□□□□ -0.61
GCN1-206ENST00000549815 JMJD8Q96S16 334 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 ATF6BQ99941 703 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 BTBD10Q9BSF8 475 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 SUCNR1Q9BXA5 334 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 PLA2G12AQ9BZM1 189 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 EGLN3Q9H6Z9 239 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 WDR76Q9H967 626 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 TMEM165Q9HC07 324 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 TMCC3Q9ULS5 477 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 CDH10Q9Y6N8 788 aa11.27□□□□□ -0.61
GCN1-206ENST00000549815 F5H5K5 113 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 F5H5P2 479 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 FSTL3O95633 263 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
GCN1-206ENST00000549815 PSKH1P11801 424 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 ATP6V1B2P21281 511 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 ANOS1P23352 680 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 PRSS12P56730 875 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 GNGT1P63211 74 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 TRAP1Q12931 704 aaKnown RBP11.26□□□□□ -0.61
GCN1-206ENST00000549815 ECH1Q13011 328 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 MAB21L1Q13394 359 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 GK2Q14410 553 aaPredicted RBP11.26□□□□□ -0.61
GCN1-206ENST00000549815 SLC35F1Q5T1Q4 408 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 C16orf89Q6UX73 402 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 MUC20Q8N307 709 aaPredicted RBP11.26□□□□□ -0.61
GCN1-206ENST00000549815 OR9Q2Q8NGE9 314 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 OR8D4Q8NGM9 314 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 PITX2Q99697 317 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 RBM4Q9BWF3 364 aaKnown RBP11.26□□□□□ -0.61
GCN1-206ENST00000549815 TRIM15Q9C019 465 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 IL20Q9NYY1 176 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 KCNG2Q9UJ96 466 aa11.26□□□□□ -0.61
GCN1-206ENST00000549815 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms