RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ABCD3P28288 659 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 GALNSP34059 522 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 MEF2DQ14814 521 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 INPP5JQ15735 1006 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 C1orf100Q5SVJ3 147 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 HLA-DQA1Q5Y7H0 255 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 INO80EQ8NBZ0 244 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 SLC26A10Q8NG04 563 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 PHB2Q99623 299 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 MED29Q9NX70 200 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 PRR13Q9NZ81 148 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 SLC5A6Q9Y289 635 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ARID1AO14497 2285 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ASXL3Q9C0F0 2248 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 MPTX1A8MV57 137 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 A8MVM7 634 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ALG1L2C9J202 215 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 NDUFA2O43678 99 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 TSPAN2O60636 221 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 PGAM2P15259 253 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 RAB3AP20336 220 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 PABPC1L2AQ5JQF8 200 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 COL13A1Q5TAT6 717 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 OR10Z1Q8NGY1 313 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 RLN3Q8WXF3 142 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 SLC6A15Q9H2J7 730 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 KCNK7Q9Y2U2 307 aa12.62□□□□□ -0.39
RAPGEF3-218ENST00000548919 LOC390937A0A1W2PQ73 354 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 METTL21EPA6NDL7 271 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 ATG12O94817 140 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 F12P00748 615 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 SLC26A5P58743 744 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 RAB12Q6IQ22 244 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 ZNF813Q6ZN06 617 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 PUSL1Q8N0Z8 303 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 PAQR8Q8TEZ7 354 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 ADAT3Q96EY9 351 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 ARL5BQ96KC2 179 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 NICN1Q9BSH3 213 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 SELENOIQ9C0D9 397 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 PDE7BQ9NP56 450 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 CUTCQ9NTM9 273 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 EFSO43281 561 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 ZNF208O43345 1280 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 IL2RAP01589 272 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 CRABP1P29762 137 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 MRPS21P82921 87 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 NSDHLQ15738 373 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 KIAA0895LQ68EN5 471 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 MARCH1Q8TCQ1 289 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 WWTR1Q9GZV5 400 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 DUSP15Q9H1R2 295 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 SLC2A8Q9NY64 477 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 RAB22AQ9UL26 194 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 CSAG2Q9Y5P2 127 aa12.61□□□□□ -0.39
RAPGEF3-218ENST00000548919 IGKV3D-11A0A0A0MRZ8 115 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 A6NJ64 397 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 OR6C76A6NM76 312 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 ABCD4O14678 606 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 AHSA1O95433 338 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 ISG15P05161 165 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 H2BFMP0C1H6 154 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 GLULP15104 373 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 SERPINF1P36955 418 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 SHISA6Q6ZSJ9 500 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 CBLN2Q8IUK8 224 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 BHLHE23Q8NDY6 225 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 OR5AP2Q8NGF4 316 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 PHYHIPLQ96FC7 376 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 PURGQ9UJV8 347 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 MS4A18H0YCH9 400 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 NUDT21O43809 227 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 ACTL6AO96019 429 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 DRD1P21728 446 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 MS4A18Q3C1V0 323 aa12.6□□□□□ -0.39
RAPGEF3-218ENST00000548919 TMEM71Q6P5X7 295 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms