RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ZNF878C9JN71 531 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 SULT1C2O00338 296 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 CER1O95813 267 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ANOS1P23352 680 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 DUSP3P51452 185 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 SLC35A1P78382 337 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 GTPBP8Q8N3Z3 284 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 M1APQ8TC57 530 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 OR51E1Q8TCB6 317 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 FOXRED1Q96CU9 486 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ASH2LQ9UBL3 628 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 WDFY4Q6ZS81 3184 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 LOC102725191A0A1B0GVB3 256 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 WIPF3A6NGB9 483 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF726A6NNF4 738 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 G3V3Y1 287 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 TNFRSF10AO00220 468 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 RER1O15258 196 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 RLN1P04808 185 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 HSD11B1P28845 292 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF81P51508 661 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ACTBP60709 375 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 PSMA6P60900 246 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ACTG1P63261 375 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 TMEM81Q6P7N7 255 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 HDDC2Q7Z4H3 204 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 OR1M1Q8NGA1 313 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 OR2Y1Q8NGV0 311 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 PTX4Q96A99 478 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 ANGPTL4Q9BY76 406 aa16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 PNRC2Q9NPJ4 139 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-208ENST00000548436 SLC2A1P11166 492 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 FKBP2P26885 142 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 PRKXP51817 358 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 CLDN17P56750 224 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 GNG2P59768 71 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 GABREP78334 506 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 H3F3AP84243 136 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 PAQR4Q8N4S7 273 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 ACBD4Q8NC06 268 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 SOX7Q9BT81 388 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 A0A087WZY1 265 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 A0A0A6YYH2 397 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 A6NJ64 397 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 RAB6AP20340 208 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 SSR4P51571 173 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 TAS2R19P59542 299 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF529Q6P280 563 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 TMEM229BQ8NBD8 167 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF680Q8NEM1 530 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 NKD1Q969G9 470 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 NTNG2Q96CW9 530 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 ZC3H10Q96K80 434 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 CHST6Q9GZX3 395 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 SCPEP1Q9HB40 452 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF160Q9HCG1 818 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 SH2D2AQ9NP31 389 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 TMEM138Q9NPI0 162 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF319Q9P2F9 582 aa16.41■□□□□ 0.22
PRPF40B-208ENST00000548436 COL27A1Q8IZC6 1860 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 OR2M5A3KFT3 312 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 TMEM235A6NFC5 223 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 ZIC3O60481 467 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 OR2A4O95047 310 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 MPC2O95563 127 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 PMS2P2O95744 297 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 GIPP09681 153 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 LIFP15018 202 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 ZNF121P58317 390 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 QRFPP83859 136 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 ZXDAP98168 799 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 UNC119Q13432 240 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 KCNMB1Q16558 191 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 C2orf68Q2NKX9 166 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 RNF144BQ7Z419 303 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 GALNT16Q8N428 558 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 FTMTQ8N4E7 242 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 OR8B12Q8NGG6 310 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 OR13C9Q8NGT0 318 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 OR2A7Q96R45 310 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 KLK13Q9UKR3 277 aa16.4■□□□□ 0.22
PRPF40B-208ENST00000548436 M0QYG6 137 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RAB3DO95716 219 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 TSPAN5P62079 268 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 TAF13Q15543 124 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RHOUQ7L0Q8 258 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 C1orf210Q8IVY1 113 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC22A24Q8N4F4 322 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 OR5D14Q8NGL3 314 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 JSRP1Q96MG2 331 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 DPCDQ9BVM2 203 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 TINAGL1Q9GZM7 467 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 SMOC1Q9H4F8 434 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC39A1Q9NY26 324 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RAB22AQ9UL26 194 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 NCKAP5O14513 1909 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 NSG1A0A0A6YYJ2 146 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 IGHV3-15A0A0B4J1V0 119 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms