RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 COLCA1Q6ZS62 124 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 ZNF771Q7L3S4 317 aaPredicted RBP7.9□□□□□ -1.14
YBX3-218ENST00000546298 C1orf87Q8N0U7 546 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 OR5AS1Q8N127 324 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 BPIFB2Q8N4F0 458 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 OR52E2Q8NGJ4 325 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 OR2T4Q8NH00 348 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 OR2V2Q96R30 315 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 RBM4Q9BWF3 364 aaKnown RBP7.9□□□□□ -1.14
YBX3-218ENST00000546298 C1QTNF5Q9BXJ0 243 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 TRIM15Q9C019 465 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 MUC13Q9H3R2 512 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 TMEM100Q9NV29 134 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 ACTR3BQ9P1U1 418 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 NOP16Q9Y3C1 178 aaKnown RBP7.9□□□□□ -1.14
YBX3-218ENST00000546298 YLPM1P49750 1951 aaKnown RBP7.9□□□□□ -1.15
YBX3-218ENST00000546298 OR6C68A6NDL8 312 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 IQCF6A8MYZ5 107 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 B2RBV5 119 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 F5H5K5 113 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 TMEM178BH3BS89 294 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 CCNB2O95067 398 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 GPANK1O95872 356 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 AVPP01185 164 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 LCATP04180 440 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 ACSM4P0C7M7 580 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 MMP16P51512 607 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 HILS1P60008 231 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 TRAP1Q12931 704 aaKnown RBP7.89□□□□□ -1.15
YBX3-218ENST00000546298 HLXQ14774 488 aaPredicted RBP7.89□□□□□ -1.15
YBX3-218ENST00000546298 ZMYND11Q15326 602 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 ESCO2Q56NI9 601 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 CLEC12AQ5QGZ9 265 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 SLC35F1Q5T1Q4 408 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 SLC18B1Q6NT16 456 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 RBMS3Q6XE24 437 aaKnown RBP7.89□□□□□ -1.15
YBX3-218ENST00000546298 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
YBX3-218ENST00000546298 RASSF6Q6ZTQ3 369 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 DHFR2Q86XF0 187 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 LINC00346Q8IVM7 164 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
YBX3-218ENST00000546298 SDR9C7Q8NEX9 313 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 PROKR2Q8NFJ6 384 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 OR4C15Q8NGM1 316 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 SPTSSAQ969W0 71 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 ERGIC1Q969X5 290 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 NSL1Q96IY1 281 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 MEGF10Q96KG7 1140 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 ATF6BQ99941 703 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 SLC30A2Q9BRI3 323 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 SLC22A4Q9H015 551 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 DCAF16Q9NXF7 216 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 OR5V1Q9UGF6 321 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 CYB5R1Q9UHQ9 305 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 BAIAP2Q9UQB8 552 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 POLR3KQ9Y2Y1 108 aaPredicted RBP7.89□□□□□ -1.15
YBX3-218ENST00000546298 LYVE1Q9Y5Y7 322 aa7.89□□□□□ -1.15
YBX3-218ENST00000546298 A8MXK9 166 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 FSTL3O95633 263 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 IRF2P14316 349 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 ZFP36P26651 326 aaKnown RBP7.88□□□□□ -1.15
YBX3-218ENST00000546298 GGT2P36268 569 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 SLC6A9P48067 706 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 ERFP50548 548 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 BLVRAP53004 296 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 GYS2P54840 703 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 ACTG1P63261 375 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 ZNF154Q13106 437 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 GK3PQ14409 553 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 ZNF181Q2M3W8 571 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 RSPO1Q2MKA7 263 aaPredicted RBP7.88□□□□□ -1.15
YBX3-218ENST00000546298 KRTAP27-1Q3LI81 207 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 CYP2R1Q6VVX0 501 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 CFAP77Q6ZQR2 320 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 PGAP1Q75T13 922 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 MRPL21Q7Z2W9 205 aaKnown RBP7.88□□□□□ -1.15
YBX3-218ENST00000546298 CELF2-AS1Q8N7Q2 184 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 SEMA6DQ8NFY4 1073 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 OR11L1Q8NGX0 322 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 FAM216AQ8WUB2 273 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 SPRYD4Q8WW59 207 aaPredicted RBP7.88□□□□□ -1.15
YBX3-218ENST00000546298 GCDHQ92947 438 aaPredicted RBP7.88□□□□□ -1.15
YBX3-218ENST00000546298 PLEKHA8Q96JA3 519 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 SIGLEC11Q96RL6 698 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 MRI1Q9BV20 369 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 MAGIXQ9H6Y5 334 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 EGLN3Q9H6Z9 239 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 REEP1Q9H902 201 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 NTN4Q9HB63 628 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 IL20Q9NYY1 176 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 MIOXQ9UGB7 285 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 LRCH1Q9Y2L9 728 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 AUP1Q9Y679 476 aa7.88□□□□□ -1.15
YBX3-218ENST00000546298 CEACAM18A8MTB9 384 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 F5H0A9 414 aaPredicted RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 F5H5P2 479 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 M0R135 149 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 BHLHE40O14503 412 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 RGS9O75916 674 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms