RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 MFSD9Q8NBP5 474 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 SLC30A7Q8NEW0 376 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 OR5M8Q8NGP6 311 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 GALNT14Q96FL9 552 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 PGLYRP3Q96LB9 341 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 NDC1Q9BTX1 674 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 C1QTNF2Q9BXJ5 285 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 SLC13A4Q9UKG4 626 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 ZNF346Q9UL40 294 aaKnown RBP7.09□□□□□ -1.27
UBR1-202ENST00000546274 CSAG2Q9Y5P2 127 aa7.09□□□□□ -1.27
UBR1-202ENST00000546274 A0A1W2PPQ1 181 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 SYNDIG1LA6NDD5 238 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 GPR89AB7ZAQ6 455 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 C1QTNF3-AMACRE9PGA6 284 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 PEX12O00623 359 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 TP53I11O14683 189 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 PLPP2O43688 288 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 HLA-AP01891 365 aaKnown RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 MT-ND5P03915 603 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 CD3DP04234 171 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 DCNP07585 359 aaKnown RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 FCGR3AP08637 254 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 GSTP1P09211 210 aaKnown RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 CXCL1P09341 107 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 TRGC1P0CF51 173 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 GPR89BP0CG08 455 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 RPS4Y1P22090 263 aaKnown RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 SLC2A5P22732 501 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 ARHGAP11BQ3KRB8 267 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 RTL6Q6ICC9 239 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 SLC25A24Q6NUK1 477 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 ZNF774Q6NX45 483 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 THSD4Q6ZMP0 1018 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 RAB42Q8N4Z0 105 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 OR13C2Q8NGS9 318 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 MITD1Q8WV92 249 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 HPSE2Q8WWQ2 592 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 OIT3Q8WWZ8 545 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 URM1Q9BTM9 101 aaKnown RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 OR51V1Q9H2C8 321 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 GAL3ST2Q9H3Q3 398 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 SIDT1Q9NXL6 827 aaKnown RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 CLDND1Q9NY35 253 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 CXXC1Q9P0U4 656 aaPredicted RBP7.09□□□□□ -1.28
UBR1-202ENST00000546274 SH3BGRL2Q9UJC5 107 aa7.09□□□□□ -1.28
UBR1-202ENST00000546274 UNC119BA6NIH7 251 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 SOX1O00570 391 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 ITGB1BP1O14713 200 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 CD8AP01732 235 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TYRP1P17643 537 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 S1PR1P21453 382 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ITPKBP27987 946 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TEAD1P28347 426 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TAS2R20P59543 309 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 BTN3A2P78410 334 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ZNF85Q03923 595 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 JOSD1Q15040 202 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 VWA2Q5GFL6 755 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 Q6ZRG5 221 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 SSX7Q7RTT5 188 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 S100A7AQ86SG5 101 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 PEG10Q86TG7 708 aaKnown RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 GID4Q8IVV7 300 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 RFLNBQ8N5W9 214 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ADAMTS15Q8TE58 950 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ASB17Q8WXJ9 295 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 SUSD6Q92537 303 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TIMM29Q9BSF4 260 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 MTHFD2LQ9H903 347 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 CERS4Q9HA82 394 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 FBXO34Q9NWN3 711 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 KLHL28Q9NXS3 571 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 WSB2Q9NYS7 404 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 THAP10Q9P2Z0 257 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 FOXJ3Q9UPW0 622 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 HS3ST3B1Q9Y662 390 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ZNF780BQ9Y6R6 833 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TGIF2-C20orf24A0A0A6YYL0 155 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TCRBV21S2A2A0A5A6 115 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ZNF724A8MTY0 619 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 PLGP00747 810 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 IGHEP01854 428 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ERCC1P07992 297 aaPredicted RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 OR4A8P0C604 315 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 SLC25A4P12235 298 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 CD82P27701 267 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 HTR2CP28335 458 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 TLE4Q04727 773 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 DUSP8Q13202 625 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 HNF4GQ14541 408 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 FHL5Q5TD97 284 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 HSD17B11Q8NBQ5 300 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 OR6N1Q8NGY5 312 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 ARSGQ96EG1 525 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 RRNAD1Q96FB5 475 aaKnown RBP7.08□□□□□ -1.28
UBR1-202ENST00000546274 SDF2Q99470 211 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
UBR1-202ENST00000546274 RAB11FIP5Q9BXF6 653 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms