RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 COLCA1Q6ZS62 124 aa17.59■□□□□ 0.41
HMGA2-211ENST00000545998 LRP11Q86VZ4 500 aa17.59■□□□□ 0.41
HMGA2-211ENST00000545998 MARS2Q96GW9 593 aaKnown RBP17.59■□□□□ 0.41
HMGA2-211ENST00000545998 C1QTNF5Q9BXJ0 243 aa17.59■□□□□ 0.41
HMGA2-211ENST00000545998 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.59■□□□□ 0.41
HMGA2-211ENST00000545998 H0YAE9 185 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 H0YJX3 145 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 J3QW42 95 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 M0R135 149 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 PAX1P15863 534 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 TPTEP56180 551 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 GRB2P62993 217 aaKnown RBP17.58■□□□□ 0.41
HMGA2-211ENST00000545998 POU4F2Q12837 409 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 TAF13Q15543 124 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 SPATA46Q5T0L3 261 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 SLC35F2Q8IXU6 374 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 SLC25A40Q8TBP6 338 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 APH1BQ8WW43 257 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 APOBEC3DQ96AK3 386 aaPredicted RBP17.58■□□□□ 0.41
HMGA2-211ENST00000545998 ZNF799Q96GE5 643 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 DOK1Q99704 481 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 KCNJ15Q99712 375 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 SYT3Q9BQG1 590 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 OR2J1Q9GZK6 312 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 POFUT1Q9H488 388 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 CLN6Q9NWW5 311 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 COPS3Q9UNS2 423 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 STARD10Q9Y365 291 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 TMEM14AQ9Y6G1 99 aa17.58■□□□□ 0.41
HMGA2-211ENST00000545998 CDKN1AP38936 164 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 SLC15A1P46059 708 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 MTNR1AP48039 350 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 AQP4P55087 323 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 IL5RAQ01344 420 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 NAA40Q86UY6 237 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 SYNPRQ8TBG9 265 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 Q96MT0 163 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 COG8Q96MW5 612 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 MNTQ99583 582 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 CACNG6Q9BXT2 260 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF701Q9NV72 531 aaPredicted RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 MYEF2Q9P2K5 600 aaKnown RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 PRRC2AP48634 2157 aaKnown RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 IGLV3-9A0A075B6K5 115 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 SNTNA6NMZ2 147 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 H3BSA7 217 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 APOL3O95236 402 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 CLPTM1O96005 669 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 TUBG1P23258 451 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 PRKXP51817 358 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 SNRPD2P62316 118 aaKnown RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 IL18R1Q13478 541 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 MAD2L1BPQ15013 274 aaPredicted RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF718Q3SXZ3 478 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 MBNL2Q5VZF2 373 aaKnown RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 DRAM2Q6UX65 266 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 RFLNBQ8N5W9 214 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 KLF14Q8TD94 323 aaPredicted RBP17.57■□□□□ 0.4
HMGA2-211ENST00000545998 ASB17Q8WXJ9 295 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 TFAP2CQ92754 450 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 VCX3BQ9H321 246 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 TUBG2Q9NRH3 451 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 DUSP13Q9UII6 198 aa17.57■□□□□ 0.4
HMGA2-211ENST00000545998 PRR32B1ATL7 298 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 WBP4O75554 376 aaKnown RBP17.56■□□□□ 0.4
HMGA2-211ENST00000545998 GNAO1P09471 354 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 H2BFMP0C1H6 154 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 MPV17P39210 176 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 KLF3P57682 345 aaPredicted RBP17.56■□□□□ 0.4
HMGA2-211ENST00000545998 ISL1P61371 349 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 LRRN1Q6UXK5 716 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 SETD9Q8NE22 299 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 RNFT2Q96EX2 444 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 GSX2Q9BZM3 304 aa17.56■□□□□ 0.4
HMGA2-211ENST00000545998 ITPR3Q14573 2671 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 LCATP04180 440 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 BMP4P12644 408 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 HSD11B1P28845 292 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 SLC6A9P48067 706 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 PTH2RP49190 550 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 CXCR4P61073 352 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 ROM1Q03395 351 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 TMEM255AQ5JRV8 349 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 KCTD18Q6PI47 426 aaPredicted RBP17.55■□□□□ 0.4
HMGA2-211ENST00000545998 DEGS2Q6QHC5 323 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 USP51Q70EK9 711 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 FOXC2Q99958 501 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 SLCO1C1Q9NYB5 712 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 FBXO9Q9UK97 447 aaPredicted RBP17.55■□□□□ 0.4
HMGA2-211ENST00000545998 PMF1-BGLAPU3KQ54 211 aa17.55■□□□□ 0.4
HMGA2-211ENST00000545998 H7C417 338 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 PHYHO14832 338 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 IGHV3-13P01766 116 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 OR2T7P0C7T2 308 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 ANOS1P23352 680 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 GCH1P30793 250 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 ATP6V1E1P36543 226 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 CX3CR1P49238 355 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 SELENOVP59797 346 aa17.54■□□□□ 0.4
HMGA2-211ENST00000545998 ZNF91Q05481 1191 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms