RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZNF514Q96K75 400 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-224ENST00000545688 VSTM2LQ96N03 204 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 OR2M4Q96R27 311 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 TBCDQ9BTW9 1192 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 GPR61Q9BZJ8 451 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 ATG10Q9H0Y0 220 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 SYTL2Q9HCH5 934 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 SLC40A1Q9NP59 571 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 GNPTGQ9UJJ9 305 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 TRAPPC4Q9Y296 219 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 BTRCQ9Y297 605 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 ANKRD12Q6UB98 2062 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 DOCK4Q8N1I0 1966 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 CMYA5Q8N3K9 4069 aa2.28□□□□□ -2.04
SNHG1-224ENST00000545688 NBEAL2Q6ZNJ1 2754 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 IGLV2-18A0A075B6J9 118 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 CFAP73A6NFT4 308 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 SLC9B1P1A6NJY1 282 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 ANKRD30BLA7E2S9 258 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 KLK3P07288 261 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-224ENST00000545688 HNF1AP20823 631 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 MMP11P24347 488 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 CD80P33681 288 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 MAGEA5P43359 124 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 GABRA4P48169 554 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 KLK7P49862 253 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 YBEYP58557 167 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-224ENST00000545688 YWHAEP62258 255 aaKnown RBP2.27□□□□□ -2.05
SNHG1-224ENST00000545688 RIPPLY1Q0D2K3 151 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 CEBPEQ15744 281 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 DEFB113Q30KQ7 82 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 SLC25A52Q3SY17 297 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 ACSM5Q6NUN0 579 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 NCCRP1Q6ZVX7 275 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-224ENST00000545688 APTXQ7Z2E3 356 aaKnown RBP2.27□□□□□ -2.05
SNHG1-224ENST00000545688 HMGN2P46Q86SG4 172 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 DOLPP1Q86YN1 238 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 RAB43Q86YS6 212 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 UMODL1-AS1Q8N2C9 162 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 SVOPLQ8N434 492 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 C15orf54Q8N8G6 183 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 DNAAF3Q8N9W5 541 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 MINDY2Q8NBR6 621 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 LINC00301Q8NCQ3 95 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 OR2Y1Q8NGV0 311 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 OR56B4Q8NH76 319 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 TGM7Q96PF1 710 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 CHRNA10Q9GZZ6 450 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 BLZF1Q9H2G9 400 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF385DQ9H6B1 395 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 LRRC19Q9H756 370 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 PLEKHF2Q9H8W4 249 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 CALHM2Q9HA72 323 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 ANO10Q9NW15 660 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 SLC23A2Q9UGH3 650 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 MOSPD1Q9UJG1 213 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 ABCA1O95477 2261 aa2.27□□□□□ -2.05
SNHG1-224ENST00000545688 TRAV17A0A0B4J275 112 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 IQANK1A0A1B0GTG1 560 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 SYCE3A1L190 88 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 GPR89AB7ZAQ6 455 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 E9PBE3 544 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 GOLGA8SH3BPF8 625 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 STX7O15400 261 aaKnown RBP2.26□□□□□ -2.05
SNHG1-224ENST00000545688 SS18L1O75177 396 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-224ENST00000545688 RBBP9O75884 186 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 LCA5LO95447 670 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 LGI1O95970 557 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 F10P00742 488 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 GPR89BP0CG08 455 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 RBMY1CP0DJD4 496 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 KRT13P13646 458 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF30P17039 623 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 NMUP48645 174 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 STC1P52823 247 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 RHOAP61586 193 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 GABPB1Q06547 395 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF763Q0D2J5 394 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 RAB40BQ12829 278 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 IHHQ14623 411 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 CHRFAM7AQ494W8 412 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 CCDC40Q4G0X9 1142 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 PTPN20Q4JDL3 420 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 KLF17Q5JT82 389 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-224ENST00000545688 LY6G6FQ5SQ64 297 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 CTRB2Q6GPI1 263 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 FAM173BQ6P4H8 233 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 ISLR2Q6UXK2 745 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 FAM183BPQ6ZVS7 135 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF547Q8IVP9 402 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 RNF148Q8N7C7 305 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 PIH1D2Q8WWB5 315 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 SHC3Q92529 594 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 FCGR1BQ92637 280 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 ARPC1AQ92747 370 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 NTAN1Q96AB6 310 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 NSMCE2Q96MF7 247 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 PSKH2Q96QS6 385 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 LYSMD1Q96S90 227 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms