RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 KRT77Q7Z794 578 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 LHFPL3Q86UP9 236 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 MYDGFQ969H8 173 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 SPTSSAQ969W0 71 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 MYCBPQ99417 103 aaPredicted RBP11.31□□□□□ -0.6
DDX11-227ENST00000544652 CDH20Q9HBT6 801 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
DDX11-227ENST00000544652 BLOC1S6Q9UL45 172 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 EXOSC1Q9Y3B2 195 aaKnown RBP11.31□□□□□ -0.6
DDX11-227ENST00000544652 DSCAMO60469 2012 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 PTGES3LE9PB15 166 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 J3QW42 95 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 M0R135 149 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 MAGEB4O15481 346 aaPredicted RBP11.3□□□□□ -0.6
DDX11-227ENST00000544652 APOC1P02654 83 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 NR4A1P22736 598 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 VAMP1P23763 118 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 COL8A1P27658 744 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 C21orf33P30042 268 aaPredicted RBP11.3□□□□□ -0.6
DDX11-227ENST00000544652 WNT5AP41221 380 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 ETV1P50549 477 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 TPTEP56180 551 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 ACTA2P62736 377 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 ACTG2P63267 376 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 NKX6-1P78426 367 aaPredicted RBP11.3□□□□□ -0.6
DDX11-227ENST00000544652 DRAM2Q6UX65 266 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 PLEKHG7Q6ZR37 379 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 SPATC1Q76KD6 591 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 PRSS45Q7RTY3 260 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 NAA40Q86UY6 237 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 SYS1Q8N2H4 156 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 SGCDQ92629 289 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 PIK3IP1Q96FE7 263 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 ZNF799Q96GE5 643 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 C4orf45Q96LM5 186 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 DOK1Q99704 481 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 CDCA4Q9BXL8 241 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 TTTY10Q9BZA0 68 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 ELOVL3Q9HB03 270 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 TBCCD1Q9NVR7 557 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 RNF115Q9Y4L5 304 aa11.3□□□□□ -0.6
DDX11-227ENST00000544652 HELZ2Q9BYK8 2649 aaKnown RBP11.3□□□□□ -0.6
DDX11-227ENST00000544652 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 METTL15A6NJ78 407 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 F5H5K5 113 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 PSMD9O00233 223 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 MRPS14O60783 128 aaKnown RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 SMPD2O60906 423 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 KRT8P05787 483 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 HTR1AP08908 422 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 MYL12AP19105 171 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 CCNOP22674 350 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 HSD11B1P28845 292 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 RGS6P49758 472 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 RIDAP52758 137 aaKnown RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 UCP2P55851 309 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 GALK2Q01415 458 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 IRF3Q14653 427 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 TAF13Q15543 124 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 ADAM5Q6NVV9 412 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 PRSS48Q7RTY5 328 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 ZNF101Q8IZC7 436 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 ZNF485Q8NCK3 441 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 LILRB1Q8NHL6 650 aaPredicted RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 KCNS3Q9BQ31 491 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 ERVK-18Q9QC07 812 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 IKZF2Q9UKS7 526 aa11.29□□□□□ -0.6
DDX11-227ENST00000544652 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 ANKHD1Q8IWZ3 2542 aaKnown RBP11.29□□□□□ -0.6
DDX11-227ENST00000544652 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 ACOD1A6NK06 481 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 RGS10O43665 173 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 CTAG2O75638 210 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 PNPP00491 289 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 PLAUP00749 431 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 TUBG1P23258 451 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 GLRXP35754 106 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 RAD52P43351 418 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 CX3CR1P49238 355 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 PRKXP51817 358 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 OR12D2P58182 307 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 KCTD21Q4G0X4 260 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 LIPNQ5VXI9 398 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 FDX2Q6P4F2 183 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms