RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 LILRB1Q8NHL6 650 aaPredicted RBP14.78□□□□□ -0.04
LIG1-204ENST00000542460 ZNF799Q96GE5 643 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 RHNO1Q9BSD3 238 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 JAM3Q9BX67 310 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 TEX15Q9BXT5 2789 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 CELSR2Q9HCU4 2923 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 TBCCD1Q9NVR7 557 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 CISD1Q9NZ45 108 aaKnown RBP14.78□□□□□ -0.04
LIG1-204ENST00000542460 DIMT1Q9UNQ2 313 aaKnown RBP14.78□□□□□ -0.04
LIG1-204ENST00000542460 TPRKBQ9Y3C4 175 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 LRP12Q9Y561 859 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 PCDHGB5Q9Y5G0 923 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 CENPEQ02224 2701 aa14.78□□□□□ -0.04
LIG1-204ENST00000542460 A0A1W2PPR1 153 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 PRR32B1ATL7 298 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 J3QW42 95 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 PSMD9O00233 223 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 SULT1C4O75897 302 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 KRT8P05787 483 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 FAM157BP0CG42 384 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 DCTDP32321 178 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 SLC6A9P48067 706 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 RIDAP52758 137 aaKnown RBP14.77□□□□□ -0.04
LIG1-204ENST00000542460 SNTB2Q13425 540 aaKnown RBP14.77□□□□□ -0.04
LIG1-204ENST00000542460 PLEKHG7Q6ZR37 379 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 AHSA2Q719I0 299 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 KCTD20Q7Z5Y7 419 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 ZNF101Q8IZC7 436 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 ZNF786Q8N393 782 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 ZNF283Q8N7M2 679 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 AKAP1Q92667 903 aaKnown RBP eCLIP14.77□□□□□ -0.04
LIG1-204ENST00000542460 MRPL48Q96GC5 212 aaKnown RBP14.77□□□□□ -0.04
LIG1-204ENST00000542460 C1QTNF5Q9BXJ0 243 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 FKBP14Q9NWM8 211 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 ERVK13-1Q9NX77 482 aa14.77□□□□□ -0.04
LIG1-204ENST00000542460 METTL15A6NJ78 407 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 E7EQL1 145 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 PTGES3LE9PB15 166 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 SMPD2O60906 423 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 NGFP01138 241 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 GLRXP35754 106 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 CX3CR1P49238 355 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 RPS23P62266 143 aaKnown RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 GALEQ14376 348 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 RBM48Q5RL73 367 aaKnown RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 ZNF684Q5T5D7 378 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 COLCA1Q6ZS62 124 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 LHFPL3Q86UP9 236 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 NAA40Q86UY6 237 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 EGFL6Q8IUX8 553 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 STX19Q8N4C7 294 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 ABHD4Q8TB40 342 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 NEUROG1Q92886 237 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 APOBEC3DQ96AK3 386 aaPredicted RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 COG8Q96MW5 612 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 DOK1Q99704 481 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 OR51B6Q9H340 312 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 SP140LQ9H930 580 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 CA10Q9NS85 328 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 MRM2Q9UI43 246 aaKnown RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 VSTM5A8MXK1 200 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 MAGEB4O15481 346 aaPredicted RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 LCATP04180 440 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 LCKP06239 509 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 MYL12AP19105 171 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 TUBG1P23258 451 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 CRHBPP24387 322 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 ACTA2P62736 377 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 ACTG2P63267 376 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 CDONQ4KMG0 1287 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 YIPF7Q8N8F6 280 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 OR5L1Q8NGL2 311 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 OR1J1Q8NGS3 322 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 MYDGFQ969H8 173 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 FBXW5Q969U6 566 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 ZNF649Q9BS31 505 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 ALG8Q9BVK2 526 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 ZNF442Q9H7R0 627 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 TUBG2Q9NRH3 451 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 CHCHD3Q9NX63 227 aaKnown RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 BLOC1S6Q9UL45 172 aa14.76□□□□□ -0.05
LIG1-204ENST00000542460 EXOSC1Q9Y3B2 195 aaKnown RBP14.76□□□□□ -0.05
LIG1-204ENST00000542460 HS3ST1O14792 307 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 TACSTD2P09758 323 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 LIMS3P0CW19 117 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 LIMS4P0CW20 117 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 THBS4P35443 961 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 SLC35A2P78381 396 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 ZNF544Q6NX49 715 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 VHLLQ6RSH7 139 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 RFPL4BQ6ZWI9 263 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 FAM220AQ7Z4H9 259 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 TMEM171Q8WVE6 324 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 DHRS9Q9BPW9 319 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 DUSP21Q9H596 190 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 PLEKHF2Q9H8W4 249 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 GNG8Q9UK08 70 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 STARD10Q9Y365 291 aa14.75□□□□□ -0.05
LIG1-204ENST00000542460 CACNA1DQ01668 2161 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms