RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 CSAG2Q9Y5P2 127 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 PRRC2CQ9Y520 2896 aaKnown RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 TMEM269A0A1B0GVZ9 245 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 PRSS37A4D1T9 235 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 STK17BO94768 372 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 SLC2A1P11166 492 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 LDLRAD3Q86YD5 345 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 ZNF101Q8IZC7 436 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 OR2I1PQ8NGU4 316 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 MARCH1Q8TCQ1 289 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 SLC25A21Q9BQT8 299 aaPredicted RBP13.72□□□□□ -0.21
CNOT9-208ENST00000542068 DNTTIP1Q9H147 329 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 PTGES2Q9H7Z7 377 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 GSKIPQ9P0R6 139 aa13.72□□□□□ -0.21
CNOT9-208ENST00000542068 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 AKR1C3P42330 323 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 SLC37A1P57057 533 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 MPPED2Q15777 294 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 PAN3Q58A45 887 aaKnown RBP13.71□□□□□ -0.21
CNOT9-208ENST00000542068 ACOT7LQ6ZUV0 252 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 ADGRE4PQ86SQ3 457 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 SLC19A3Q9BZV2 496 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 POLR1DQ9Y2S0 133 aa13.71□□□□□ -0.21
CNOT9-208ENST00000542068 IGHV1OR15-9A0A0B4J2B8 117 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 TLCD2A6NGC4 264 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 METTL12A8MUP2 240 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 EIF4E2O60573 245 aaKnown RBP13.71□□□□□ -0.22
CNOT9-208ENST00000542068 ZNF823P16415 610 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 NFYBP25208 207 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 SERPINF1P36955 418 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 NPY4RP50391 375 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 FGL1Q08830 312 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 GALNTL5Q7Z4T8 443 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 TMEM229BQ8NBD8 167 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 OR13C9Q8NGT0 318 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 FAM131CQ96AQ9 280 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 ZNF587Q96SQ5 575 aaPredicted RBP13.71□□□□□ -0.22
CNOT9-208ENST00000542068 PARP12Q9H0J9 701 aaKnown RBP13.71□□□□□ -0.22
CNOT9-208ENST00000542068 ZNF304Q9HCX3 659 aa13.71□□□□□ -0.22
CNOT9-208ENST00000542068 TMEM200CA6NKL6 621 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 ZNF735P0CB33 412 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 HNRNPKP61978 463 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNOT9-208ENST00000542068 FUT7Q11130 342 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 KCTD18Q6PI47 426 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-208ENST00000542068 MOB3CQ70IA8 216 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 RNF128Q8TEB7 428 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 MAFIPQ8WZ33 124 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 CNTD2Q9H8S5 307 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 BARX1Q9HBU1 254 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-208ENST00000542068 FSCN3Q9NQT6 498 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 SLC2A4RGQ9NR83 387 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 FGF21Q9NSA1 209 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 MED29Q9NX70 200 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 CLDN16Q9Y5I7 305 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 PI4KAP42356 2102 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 ADAP1O75689 374 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 ACTL6AO96019 429 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 AIMP2Q13155 320 aaKnown RBP13.7□□□□□ -0.22
CNOT9-208ENST00000542068 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 DNM1P46Q6ZS02 220 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 OR52N4Q8NGI2 321 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 OR1L3Q8NH93 324 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 FOXRED1Q96CU9 486 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-208ENST00000542068 PHB2Q99623 299 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 SEC61A2Q9H9S3 476 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 HHLA2Q9UM44 414 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 PRELID3BQ9Y3B1 194 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 HTR3BO95264 441 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 ISXQ2M1V0 245 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 CARD17Q5XLA6 110 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 ZNF248Q8NDW4 579 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 CMSS1Q9BQ75 279 aaKnown RBP13.7□□□□□ -0.22
CNOT9-208ENST00000542068 BANF2Q9H503 90 aa13.7□□□□□ -0.22
CNOT9-208ENST00000542068 PHF3Q92576 2039 aaKnown RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 TMEM218A2RU14 115 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 C9orf170A2RU37 121 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 RPL27P61353 136 aaKnown RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 RBM39Q14498 530 aaKnown RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 ZNF440Q8IYI8 595 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 C8orf44Q96CB5 159 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 C12orf57Q99622 126 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 TLNRD1Q9H1K6 362 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 PRMT8Q9NR22 394 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 OR52A1Q9UKL2 312 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 MPTX1A8MV57 137 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 SULT2B1O00204 365 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 OR2F2O95006 317 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 AHSA1O95433 338 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 CBR1P16152 277 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 ADCYAP1P18509 176 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 PPICP45877 212 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 OR2F1Q13607 317 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 LYG2Q86SG7 212 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 DAZLQ92904 295 aaKnown RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 NICN1Q9BSH3 213 aa13.69□□□□□ -0.22
CNOT9-208ENST00000542068 CHMP1AQ9HD42 196 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-208ENST00000542068 GMEB2Q9UKD1 530 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms