RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ARL9Q6T311 187 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 SPATC1Q76KD6 591 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 DPY19L4Q7Z388 723 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 ZDHHC13Q8IUH4 622 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 ZMYND19Q96E35 227 aaPredicted RBP8.28□□□□□ -1.08
YBX3-212ENST00000542002 DCLRE1CQ96SD1 692 aaKnown RBP8.28□□□□□ -1.08
YBX3-212ENST00000542002 ATF6BQ99941 703 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 SOX7Q9BT81 388 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 C1QTNF5Q9BXJ0 243 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 BPESC1Q9GZL8 116 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 GABARAPL1Q9H0R8 117 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 DDX28Q9NUL7 540 aaKnown RBP8.28□□□□□ -1.08
YBX3-212ENST00000542002 TREM2Q9NZC2 230 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 PTTG3PQ9NZH4 202 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 ATPIF1Q9UII2 106 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 KCNG2Q9UJ96 466 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 PURGQ9UJV8 347 aaKnown RBP8.28□□□□□ -1.08
YBX3-212ENST00000542002 MTORP42345 2549 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 CUBNO60494 3623 aa8.28□□□□□ -1.08
YBX3-212ENST00000542002 LRP5LA4QPB2 252 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 CCDC182A6NF36 153 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 SAC3D1A6NKF1 404 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 ZAR1LA6NP61 321 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 PRR23D1E9PI22 279 aaPredicted RBP8.27□□□□□ -1.09
YBX3-212ENST00000542002 SELENOFO60613 162 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 CDC14BO60729 498 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 RP2O75695 350 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 PRR23D2P0DMB1 279 aaPredicted RBP8.27□□□□□ -1.09
YBX3-212ENST00000542002 SLC25A16P16260 332 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 KITLGP21583 273 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 USF1P22415 310 aaPredicted RBP8.27□□□□□ -1.09
YBX3-212ENST00000542002 IL2RGP31785 369 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 OTX1P32242 354 aaPredicted RBP8.27□□□□□ -1.09
YBX3-212ENST00000542002 ZNF81P51508 661 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 ESRRGP62508 458 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 PPP2R2BQ00005 443 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 ECH1Q13011 328 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 CDK5R2Q13319 367 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 SNAPC1Q16533 368 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 TMEM249Q2WGJ8 235 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 SNAI3Q3KNW1 292 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 SLX4IPQ5VYV7 408 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 OR2T2Q6IF00 324 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 FBXW12Q6X9E4 464 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 ERI1Q8IV48 349 aaKnown RBP8.27□□□□□ -1.09
YBX3-212ENST00000542002 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 DNAJC9Q8WXX5 260 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 RDH5Q92781 318 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 APOBEC3DQ96AK3 386 aaPredicted RBP8.27□□□□□ -1.09
YBX3-212ENST00000542002 SLAMF6Q96DU3 332 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 TEAD3Q99594 435 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 CIB1Q99828 191 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 ABHD6Q9BV23 337 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 OSBPL10Q9BXB5 764 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 KRT84Q9NSB2 600 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 NKIRAS2Q9NYR9 191 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 KIF17Q9P2E2 1029 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 KLHDC2Q9Y2U9 406 aa8.27□□□□□ -1.09
YBX3-212ENST00000542002 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.09
YBX3-212ENST00000542002 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 E9PQ18 207 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 H0YL77 283 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 H3BSA7 217 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 NDUFS8O00217 210 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 TLX2O43763 284 aaPredicted RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 TIMM8AO60220 97 aaPredicted RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 LCATP04180 440 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 ERCC1P07992 297 aaPredicted RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 CSF3P09919 207 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 SLC2A1P11166 492 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 FCGR1AP12314 374 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 RAC2P15153 192 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 TUBG1P23258 451 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 CRYBB2P43320 205 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 PRKXP51817 358 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 APOFQ13790 326 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 EIF2B1Q14232 305 aaKnown RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 GGTLC2Q14390 218 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 GK2Q14410 553 aaPredicted RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 MOGQ16653 247 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 KLHL12Q53G59 568 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 AADACL4Q5VUY2 407 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 C12orf73Q69YU5 71 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 UNQ6126/PRO20091Q6UXV3 157 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 CXXC5Q7LFL8 322 aaKnown RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 OR5AS1Q8N127 324 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 RNF133Q8WVZ7 376 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 INTS14Q96SY0 518 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 PIMREGQ9BSJ6 248 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 S100A14Q9HCY8 104 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 MYOZ1Q9NP98 299 aaPredicted RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 TUBG2Q9NRH3 451 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 ZNF275Q9NSD4 429 aaPredicted RBP8.26□□□□□ -1.09
YBX3-212ENST00000542002 CENPMQ9NSP4 180 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 DCAF16Q9NXF7 216 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 ZNF319Q9P2F9 582 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 GPR160Q9UJ42 338 aa8.26□□□□□ -1.09
YBX3-212ENST00000542002 PRR32B1ATL7 298 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms