RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ARL3P36405 182 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 TAS2R31P59538 309 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 ZNF169Q14929 603 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 EXOSC6Q5RKV6 272 aaKnown RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 PXT1Q8NFP0 134 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 OR1J2Q8NGS2 313 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 OR1L3Q8NH93 324 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 GPR84Q9NQS5 396 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 A0A0D9SG52 128 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 B8ZZF3 427 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 SLC17A2O00624 439 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 PTP4A3O75365 173 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 OR7C1O76099 320 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 GPR85P60893 370 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 RNF4P78317 190 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 EBPQ15125 230 aaKnown RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 NR0B2Q15466 257 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 MESTQ5EB52 335 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 SCARB1Q8WTV0 552 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 S1PR5Q9H228 398 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 HAO2Q9NYQ3 351 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 NBASA2RRP1 2371 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 ZNF705FA8MVS1 300 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 DCTN6O00399 190 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 TNFSF14O43557 240 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 ALOX5APP20292 161 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 RPS27AP62979 156 aaKnown RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 UBA52P62987 128 aaKnown RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 MFAP5Q13361 173 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 MUC20Q8N307 709 aaPredicted RBP13.05□□□□□ -0.32
GCFC2-211ENST00000541687 LILRB2Q8N423 598 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 OR56B1Q8NGI3 324 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 MED12Q93074 2177 aa13.05□□□□□ -0.32
GCFC2-211ENST00000541687 LMO7DNF2Z398 122 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 FOXS1O43638 330 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 PLA1AQ53H76 456 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 MISPQ8IVT2 679 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 C9orf62Q8N4C0 152 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 LSMEM1Q8N8F7 131 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 FAM71CQ8NEG0 241 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 OR10A2Q9H208 303 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ST6GALNAC2Q9UJ37 374 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 C17orf51A8MQB3 221 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 NDUFB6O95139 128 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 THBS2P35442 1172 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 PNLIPRP2P54317 469 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 PDSS1Q5T2R2 415 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 TMPPEQ6ZT21 453 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 NKAIN3Q8N8D7 197 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 MARCH1Q8TCQ1 289 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 UNKLQ9H9P5 680 aaKnown RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 KLHDC2Q9Y2U9 406 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 DICER1Q9UPY3 1922 aaKnown RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 CD79AP11912 226 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ZNF250P15622 560 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ABOP16442 354 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 NME2P22392 152 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 NKX6-1P78426 367 aaPredicted RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 CD200R1LQ6Q8B3 271 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 R4GMQ9 66 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 HTR5AP47898 357 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 CX3CR1P49238 355 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 C5orf46Q6UWT4 87 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ST8SIA4Q92187 359 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ZC3HAV1LQ96H79 300 aaKnown RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 CCNL2Q96S94 520 aaPredicted RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 CMSS1Q9BQ75 279 aaKnown RBP13.04□□□□□ -0.32
GCFC2-211ENST00000541687 MENTQ9BUN1 341 aa13.04□□□□□ -0.32
GCFC2-211ENST00000541687 METTL12A8MUP2 240 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 CTAG2O75638 210 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 OMGP23515 440 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 APOBEC1P41238 236 aaKnown RBP13.03□□□□□ -0.32
GCFC2-211ENST00000541687 GPR3P46089 330 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 AGFG1P52594 562 aaKnown RBP13.03□□□□□ -0.32
GCFC2-211ENST00000541687 SLC25A1P53007 311 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 GAB4Q2WGN9 574 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 OPN5Q6U736 354 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 OR51A2Q8NGJ7 313 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 SLCO5A1Q9H2Y9 848 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 ZMIZ1Q9ULJ6 1067 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
GCFC2-211ENST00000541687 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 SYNGR4O95473 234 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 GUSBP08236 651 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 NME1P15531 152 aaKnown RBP13.03□□□□□ -0.32
GCFC2-211ENST00000541687 IL32P24001 234 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 GDF1P27539 372 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 FOLR3P41439 243 aa13.03□□□□□ -0.32
GCFC2-211ENST00000541687 AANATQ16613 207 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms