RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TMEM255BQ8WV15 326 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 CHST6Q9GZX3 395 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 UBR1Q8IWV7 1749 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 ANKRD61A6NGH8 418 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 PSMB5P28074 263 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 HOXA4Q00056 320 aaPredicted RBP14.04□□□□□ -0.16
HMGA2-210ENST00000541363 EDARADDQ8WWZ3 215 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 SLC25A46Q96AG3 418 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 NAT8BQ9UHF3 227 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
HMGA2-210ENST00000541363 APOBEC1P41238 236 aaKnown RBP14.04□□□□□ -0.16
HMGA2-210ENST00000541363 PJVKQ0ZLH3 352 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 OR4C16Q8NGL9 310 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 ASB13Q8WXK3 278 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 GALMQ96C23 342 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 GPX7Q96SL4 187 aaPredicted RBP14.04□□□□□ -0.16
HMGA2-210ENST00000541363 GSX2Q9BZM3 304 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 NHSL2Q5HYW2 709 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 SLC25A5P05141 298 aaKnown RBP14.04□□□□□ -0.16
HMGA2-210ENST00000541363 GGNBP1Q5YKI7 109 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 ONECUT1Q9UBC0 465 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 MMACHCQ9Y4U1 282 aa14.04□□□□□ -0.16
HMGA2-210ENST00000541363 C5orf49A4QMS7 147 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 NRASP01111 189 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 CST2P09228 141 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 SULT1A1P50225 295 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 TRMT12Q53H54 448 aaKnown RBP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 ARRDC2Q8TBH0 407 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 TRMT61AQ96FX7 289 aaKnown RBP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 KCNJ3P48549 501 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 GNG4P50150 75 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 PRTGQ2VWP7 1150 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 STUMQ69YW2 141 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 OR1L1Q8NH94 360 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 OPALINQ96PE5 141 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 SPATA31D1Q6ZQQ2 1576 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 A0A0A6YYJ9 748 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 GRAMD2BQ96HH9 432 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 TRAPPC4Q9Y296 219 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 COA3Q9Y2R0 106 aaPredicted RBP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 IGKV6D-41A0A0C4DH26 115 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 MGMTP16455 207 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 HNRNPA1L2Q32P51 320 aaKnown RBP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 ZNF66Q6ZN08 573 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 GDF7Q7Z4P5 450 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 HSD17B13Q7Z5P4 300 aaPredicted RBP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 CSF3RQ99062 836 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 MAP1LC3CQ9BXW4 147 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 TIMM10BQ9Y5J6 103 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 RAF1P04049 648 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 TBXA2RP21731 343 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 AOAHP28039 575 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 PIGPP57054 158 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 OR5V1Q9UGF6 321 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 PHRF1Q9P1Y6 1649 aaKnown RBP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 SIAH2O43255 324 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 HOXC13P31276 330 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.16
HMGA2-210ENST00000541363 C1orf140Q5VVS0 124 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 LAIR1Q6GTX8 287 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 TMEM88Q6PEY1 159 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 LYSMD2Q8IV50 215 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 NRG4Q8WWG1 115 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 DCCP43146 1447 aa14.03□□□□□ -0.16
HMGA2-210ENST00000541363 MED1Q15648 1581 aaPredicted RBP14.02□□□□□ -0.16
HMGA2-210ENST00000541363 RPL27P61353 136 aaKnown RBP14.02□□□□□ -0.16
HMGA2-210ENST00000541363 PRDX1Q06830 199 aaKnown RBP14.02□□□□□ -0.16
HMGA2-210ENST00000541363 ZNF816Q0VGE8 651 aaPredicted RBP14.02□□□□□ -0.16
HMGA2-210ENST00000541363 PMS2P11Q13670 270 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 SHHQ15465 462 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 SLC25A43Q8WUT9 341 aaPredicted RBP14.02□□□□□ -0.16
HMGA2-210ENST00000541363 YPEL5P62699 121 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 ATP6V1FQ16864 119 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 ZBTB44Q8NCP5 570 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 WBP2Q969T9 261 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 MISP3Q96FF7 219 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 DEDDO75618 318 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 NQO2P16083 231 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 TGIF2LXQ8IUE1 241 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 ZNF480Q8WV37 535 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 CHST8Q9H2A9 424 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 UFC1Q9Y3C8 167 aa14.02□□□□□ -0.16
HMGA2-210ENST00000541363 URB1O60287 2271 aaKnown RBP14.02□□□□□ -0.17
HMGA2-210ENST00000541363 FAM166BA8MTA8 275 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 ALX3O95076 343 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 CD68P34810 354 aaPredicted RBP14.02□□□□□ -0.17
HMGA2-210ENST00000541363 DLX1P56177 255 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 ANKRD53Q8N9V6 530 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 PTDSS2Q9BVG9 487 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 IFT22Q9H7X7 185 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 TRAV34A0A0B4J273 112 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 IGHV3-9P01782 118 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 CD1BP29016 333 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 PCSK6P29122 969 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 NOVA1P51513 510 aaKnown RBP14.02□□□□□ -0.17
HMGA2-210ENST00000541363 MARCH3Q86UD3 253 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 ZNF429Q86V71 674 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 SLC39A13Q96H72 371 aa14.02□□□□□ -0.17
HMGA2-210ENST00000541363 TXLNGYQ9BZA5 131 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms