RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PNLIPRP2P54317 469 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 RPL27P61353 136 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 H3F3CQ6NXT2 135 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 ACOT7LQ6ZUV0 252 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 RTL10Q7L3V2 364 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 LYG2Q86SG7 212 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMEM17Q86X19 198 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR5AP2Q8NGF4 316 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 NPRL2Q8WTW4 380 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 C15orf40Q8WUR7 153 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 PMM1Q92871 262 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 GABRG3Q99928 467 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 CYP8B1Q9UNU6 501 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMEM14AQ9Y6G1 99 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 MED19A0JLT2 244 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 TDGQ13569 410 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 TEX30Q5JUR7 227 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 GTPBP8Q8N3Z3 284 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 THAP6Q8TBB0 222 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 DNTTIP1Q9H147 329 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 G6PC2Q9NQR9 355 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 UPB1Q9UBR1 384 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR52A1Q9UKL2 312 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 VDAC3Q9Y277 283 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF175Q9Y473 711 aa9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 URB1O60287 2271 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-207ENST00000540998 H3BML4 177 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SSX5O60225 188 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF432O94892 652 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 TNFP01375 233 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SPP1P10451 314 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ABOP16442 354 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 IGFBP3P17936 291 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 CTHP32929 405 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMPRSS9Q7Z410 1059 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 C9orf40Q8IXQ3 194 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 PNLDC1Q8NA58 520 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 INO80EQ8NBZ0 244 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR52N5Q8NH56 324 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF519Q8TB69 540 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 GPBAR1Q8TDU6 330 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC25A21Q9BQT8 299 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC22A11Q9NSA0 550 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 C5orf63A6NC05 138 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 H7C2Y5 167 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 IL33O95760 270 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 THEGLP0DJG4 465 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 VSIG8P0DPA2 414 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 PVALBP20472 110 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 BCKDHBP21953 392 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 IL12BP29460 328 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 FOXK1P85037 733 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SCRN3Q0VDG4 424 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 FZD2Q14332 565 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF260Q3ZCT1 412 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 LANCL3Q6ZV70 420 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 COMMD2Q86X83 199 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 EDEM2Q9BV94 578 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 TBL1XR1Q9BZK7 514 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 TWSG1Q9GZX9 223 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ADAM19Q9H013 955 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ALX4Q9H161 411 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC6A15Q9H2J7 730 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 CHMP1AQ9HD42 196 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 LRP4O75096 1905 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 TMED7-TICAM2A0A0A6YYA0 188 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 A0A0A6YYD4 124 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 A0A1B0GTQ1 180 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 C9JQL5 133 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SOCS1O15524 211 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 EFSO43281 561 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR2F2O95006 317 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 IGHV4-34P06331 123 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 AGTR1P30556 359 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 CDAP32320 146 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 PRSS12P56730 875 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR2F1Q13607 317 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 NKAPLQ5M9Q1 402 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC25A42Q86VD7 318 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 FOXRED1Q96CU9 486 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 GSKIPQ9P0R6 139 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 HHLA2Q9UM44 414 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 RHBDD3Q9Y3P4 386 aa9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 NCOA6Q14686 2063 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-207ENST00000540998 LDLRAD4O15165 306 aa9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF354AO60765 605 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 SEMA4FO95754 770 aa9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 CD74P04233 296 aa9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 GABRG2P18507 467 aa9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 AKT2P31751 481 aa9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 IGLV3-21P80748 117 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 Q6ZS52 159 aa9.23□□□□□ -0.93
CDC42SE1-207ENST00000540998 ZNF101Q8IZC7 436 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms