RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LRRC34Q8IZ02 419 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 C1orf87Q8N0U7 546 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CLIP4Q8N3C7 705 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 LSMEM1Q8N8F7 131 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PNLDC1Q8NA58 520 aaKnown RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PAPD5Q8NDF8 572 aaKnown RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 OR4C13Q8NGP0 309 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 OR2T6Q8NHC8 308 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 NPRL2Q8WTW4 380 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 DNAJA4Q8WW22 397 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 LHX4Q969G2 390 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ZNF566Q969W8 418 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 TUBGCP3Q96CW5 907 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SLC25A44Q96H78 314 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 C3orf30Q96M34 536 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 OR2V2Q96R30 315 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ZNF607Q96SK3 696 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 EPYCQ99645 322 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SLC35A5Q9BS91 424 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SIRPDQ9H106 197 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 KCNN2Q9H2S1 579 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PPA2Q9H2U2 334 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 RANBP3Q9H6Z4 567 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SIAEQ9HAT2 523 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ELOVL3Q9HB03 270 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CACYBPQ9HB71 228 aaKnown RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CCNB1IP1Q9NPC3 277 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 TUBG2Q9NRH3 451 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ASIC5Q9NY37 505 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CALML5Q9NZT1 146 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ZNRD1Q9P1U0 126 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 RPS6KB2Q9UBS0 482 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 NKX1-2Q9UD57 310 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ZNF443Q9Y2A4 671 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SIGLEC9Q9Y336 463 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 IFT52Q9Y366 437 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PCDHGB5Q9Y5G0 923 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 DNAH10Q8IVF4 4471 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 DOCK11Q5JSL3 2073 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 A0A0G2JPF8 293 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 A0A1B0GWA3 101 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CENPBD1B2RD01 187 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HNRNPCL2B2RXH8 293 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TMEM233B4DJY2 109 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HNRNPCL3B7ZW38 293 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HNRNPCL1O60812 293 aaKnown RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 SERPINI2O75830 405 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 OR6A2O95222 327 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 SPDEFO95238 335 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 DUS4LO95620 317 aaKnown RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CYB5R3P00387 301 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 C1QCP02747 245 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 SLPIP03973 132 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 ABHD2P08910 425 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 PGA4P0DJD7 388 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 PGA3P0DJD8 388 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HNRNPCL4P0DMR1 293 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 KITP10721 976 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 GSTM3P21266 225 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 PSMB10P40306 273 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CCT5P48643 541 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 SRP9P49458 86 aaKnown RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CRISP3P54108 245 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 KRTAP10-11P60412 298 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 MRPS34P82930 218 aaKnown RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HOXC5Q00444 222 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 EMX2Q04743 252 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 EGFEM1PQ0D2K5 195 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TAF11Q15544 211 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 MAPK11Q15759 364 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HIST3H3Q16695 136 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 ALG10BQ5I7T1 473 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 FAM91A1Q658Y4 838 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 ULK3Q6PHR2 472 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 METAP1DQ6UB28 335 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 LYPD2Q6UXB3 125 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 IGFN1Q86VF2 1251 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CALHM3Q86XJ0 350 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 LYG1Q8N1E2 194 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TRIML2Q8N7C3 387 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CCDC63Q8NA47 563 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 FAM156AQ8NDB6 213 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 NPEPL1Q8NDH3 523 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 OR5J2Q8NH18 312 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 MUC7Q8TAX7 377 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 MCHR2Q969V1 340 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TESCQ96BS2 214 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 HAVCR1Q96D42 359 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 C4orf45Q96LM5 186 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 CCDC115Q96NT0 180 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 MOGAT1Q96PD6 335 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TECTBQ96PL2 329 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TINAGL1Q9GZM7 467 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 RAB18Q9NP72 206 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TBCCD1Q9NVR7 557 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 P2RX2Q9UBL9 471 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 DKK2Q9UBU2 259 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 BTNL2Q9UIR0 455 aa3.76□□□□□ -1.81
SNHG1-214ENST00000540865 TET2Q6N021 2002 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-214ENST00000540865 NUP214P35658 2090 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms