RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 GUSBP1Q15486 140 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 STAC2Q6ZMT1 411 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF704Q6ZNC4 412 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-204ENST00000540846 CD163Q86VB7 1156 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 SAMD12Q8N8I0 201 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 POC5Q8NA72 575 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 OR2AJ1Q8NGZ0 328 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 TSEN15Q8WW01 171 aaKnown RBP10.97□□□□□ -0.65
SMAD3-204ENST00000540846 NABP1Q96AH0 204 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 NELFAQ9H3P2 528 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 BCO1Q9HAY6 547 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 TCF7L1Q9HCS4 588 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 PNRC2Q9NPJ4 139 aaKnown RBP10.97□□□□□ -0.65
SMAD3-204ENST00000540846 CENPMQ9NSP4 180 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 FAM206AQ9NX38 181 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 ASH2LQ9UBL3 628 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 OR52A1Q9UKL2 312 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 MCTS1Q9ULC4 181 aaKnown RBP10.97□□□□□ -0.65
SMAD3-204ENST00000540846 TBC1D24Q9ULP9 559 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 GTF2A1LQ9UNN4 478 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 NBASA2RRP1 2371 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-204ENST00000540846 INTS1Q8N201 2190 aaKnown RBP10.96□□□□□ -0.65
SMAD3-204ENST00000540846 CHD6Q8TD26 2715 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 TRAV8-7A0A075B6U6 113 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 SLC22A20A6NK97 555 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 FAM25AB3EWG3 89 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 FAM25CB3EWG5 89 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 FAM25GB3EWG6 89 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 DHHO43323 396 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 SYNGR4O95473 234 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 PAHP00439 452 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 HLA-DQB1P01920 261 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 APOA1P02647 267 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 EIF4EP06730 217 aaKnown RBP10.96□□□□□ -0.65
SMAD3-204ENST00000540846 UBCP0CG48 685 aaKnown RBP10.96□□□□□ -0.65
SMAD3-204ENST00000540846 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
SMAD3-204ENST00000540846 ADRA2CP18825 462 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 FSTP19883 344 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 CFPP27918 469 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 BAK1Q16611 211 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 ODF4Q2M2E3 257 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 PYDC2Q56P42 97 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 BCL2L15Q5TBC7 163 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 NSUN5P2Q63ZY6 315 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 GFRALQ6UXV0 394 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-204ENST00000540846 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 CPT1CQ8TCG5 803 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 CMTM3Q96MX0 182 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 ULBP2Q9BZM5 246 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 NIPAL2Q9H841 368 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 MOB1AQ9H8S9 216 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 EXTL2Q9UBQ6 330 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 SPATA2Q9UM82 520 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 V9GY05 133 aa10.96□□□□□ -0.65
SMAD3-204ENST00000540846 TMEM269A0A1B0GVZ9 245 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 LOC107986453A0A1B0GWG9 222 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 A0A1W2PQ09 198 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 MBD3L4A6NDZ8 208 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 MBD3L3A6NE82 208 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 MBD3L5A6NJ08 208 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 WDR1O75083 606 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 SLC43A1O75387 559 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 TPOP07202 933 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 CSF3P09919 207 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 TALDO1P37837 337 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF84P51523 738 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 PSMD7P51665 324 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 SCN1BQ07699 218 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 IL18Q14116 193 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 ENDOGQ14249 297 aaKnown RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 P2RY14Q15391 338 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 TMEM244Q5VVB8 128 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 KLHL24Q6TFL4 600 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 DOLPP1Q86YN1 238 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 C9orf106Q8NAJ2 232 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 ST6GALNAC3Q8NDV1 305 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 OR4M1Q8NGD0 313 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 OR5H6Q8NGV6 325 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 MBD3L2Q8NHZ7 208 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 LGALS14Q8TCE9 139 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 ASB5Q8WWX0 329 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 WNT2BQ93097 391 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 PPP1R14AQ96A00 147 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 TMEM45BQ96B21 275 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 MRI1Q9BV20 369 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 CALHM2Q9HA72 323 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 BRD7Q9NPI1 651 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 DDX28Q9NUL7 540 aaKnown RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 MALT1Q9UDY8 824 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 NUFIP1Q9UHK0 495 aaKnown RBP10.95□□□□□ -0.66
SMAD3-204ENST00000540846 HHLA2Q9UM44 414 aa10.95□□□□□ -0.66
SMAD3-204ENST00000540846 A0A0B4J203 849 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF724A8MTY0 619 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 TOXO94900 526 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 CD2P06729 351 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 FCGR2AP12318 317 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms