RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 SLC35F1Q5T1Q4 408 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 DCAF12L2Q5VW00 463 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 OR2T2Q6IF00 324 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 LCN8Q6JVE9 175 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 C1orf229Q6ZS94 237 aaPredicted RBP17.69■□□□□ 0.42
CHFR-217ENST00000540537 RASSF6Q6ZTQ3 369 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 SPICQ8N5J4 248 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 OR2AJ1Q8NGZ0 328 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 ST7LQ8TDW4 575 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 ZNF582Q96NG8 517 aaPredicted RBP17.69■□□□□ 0.42
CHFR-217ENST00000540537 PITX2Q99697 317 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 ATF6BQ99941 703 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 OCEL1Q9H607 264 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 IL20Q9NYY1 176 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 PPP1R3CQ9UQK1 317 aa17.69■□□□□ 0.42
CHFR-217ENST00000540537 IFNL4K9M1U5 179 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 CCNB2O95067 398 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 AVPP01185 164 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 SBK2P0C263 348 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 ACSM4P0C7M7 580 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 TMEM155Q4W5P6 130 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 C1QL2Q7Z5L3 287 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 ATG16L2Q8NAA4 619 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 OR13G1Q8NGZ3 307 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 POP5Q969H6 163 aaKnown RBP17.68■□□□□ 0.42
CHFR-217ENST00000540537 SIGLEC11Q96RL6 698 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 DDOQ99489 341 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 PLA2G12AQ9BZM1 189 aa17.68■□□□□ 0.42
CHFR-217ENST00000540537 PNRC2Q9NPJ4 139 aaKnown RBP17.68■□□□□ 0.42
CHFR-217ENST00000540537 MRPL22Q9NWU5 206 aaKnown RBP17.68■□□□□ 0.42
CHFR-217ENST00000540537 PPIAL4EA0A075B759 164 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 LOC105371242A0A075B767 164 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 PPIAL4CA0A0B4J2A2 164 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 IQCF6A8MYZ5 107 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 PPIAL4DF5H284 164 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 FOXH1O75593 365 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 FAM107AO95990 144 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 GASTP01350 101 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 PPIAL4FP0DN26 164 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 SELEP16581 610 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 CALB2P22676 271 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 BTG1P62324 171 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 TRAP1Q12931 704 aaKnown RBP17.67■□□□□ 0.42
CHFR-217ENST00000540537 HNRNPA0Q13151 305 aaKnown RBP17.67■□□□□ 0.42
CHFR-217ENST00000540537 TRIM25Q14258 630 aaKnown RBP17.67■□□□□ 0.42
CHFR-217ENST00000540537 ZNF771Q7L3S4 317 aaPredicted RBP17.67■□□□□ 0.42
CHFR-217ENST00000540537 LRRC28Q86X40 367 aaPredicted RBP17.67■□□□□ 0.42
CHFR-217ENST00000540537 DHFR2Q86XF0 187 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 SLC30A2Q9BRI3 323 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 HCAR1Q9BXC0 346 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 PCDHB10Q9UN67 800 aa17.67■□□□□ 0.42
CHFR-217ENST00000540537 F5H5K5 113 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 ZNF823P16415 610 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 MMP16P51512 607 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 LCN2P80188 198 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 ZMYND11Q15326 602 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 LNX2Q8N448 690 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 KLHL36Q8N4N3 616 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 CYB561A3Q8NBI2 242 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 AQP11Q8NBQ7 271 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 CCDC197Q8NCU1 140 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 PROKR2Q8NFJ6 384 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 SEMA6DQ8NFY4 1073 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 OR10AD1Q8NGE0 317 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 OR8D4Q8NGM9 314 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 OR2T4Q8NH00 348 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 MEGF10Q96KG7 1140 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 PATZ1Q9HBE1 687 aaKnown RBP17.66■□□□□ 0.42
CHFR-217ENST00000540537 GCM1Q9NP62 436 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 TBC1D23Q9NUY8 699 aa17.66■□□□□ 0.42
CHFR-217ENST00000540537 A0A1B0GWJ7 208 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 TMEM178BH3BS89 294 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 VENTXO95231 258 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 EPHA1P21709 976 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 PYCR1P32322 319 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 SRP9P49458 86 aaKnown RBP17.65■□□□□ 0.42
CHFR-217ENST00000540537 TPTEP56180 551 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 MS4A2Q01362 244 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 FAM98BQ52LJ0 330 aaKnown RBP17.65■□□□□ 0.42
CHFR-217ENST00000540537 ZNF362Q5T0B9 420 aaPredicted RBP17.65■□□□□ 0.42
CHFR-217ENST00000540537 OR2T5Q6IEZ7 315 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 SLC37A3Q8NCC5 494 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 OR2T29Q8NH02 315 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 ZNF418Q8TF45 676 aaPredicted RBP17.65■□□□□ 0.42
CHFR-217ENST00000540537 ZFAND2BQ8WV99 257 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 MAP6Q96JE9 813 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 DGCR6LQ9BY27 220 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 REEP1Q9H902 201 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 VNN3Q9NY84 501 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 PRPF19Q9UMS4 504 aaKnown RBP17.65■□□□□ 0.42
CHFR-217ENST00000540537 BAIAP2Q9UQB8 552 aa17.65■□□□□ 0.42
CHFR-217ENST00000540537 POLR3KQ9Y2Y1 108 aaPredicted RBP17.65■□□□□ 0.42
CHFR-217ENST00000540537 F5H0A9 414 aaPredicted RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 MLNRO43193 412 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 LCATP04180 440 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 ZFP36P26651 326 aaKnown RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 RBMXP38159 391 aaKnown RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 MDH2P40926 338 aaKnown RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 PPP1R8Q12972 351 aaKnown RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 MALLQ13021 153 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms