RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 KIR3DL2P43630 455 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 RPS10P46783 165 aaKnown RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 BLKP51451 505 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
MSH6-210ENST00000540021 MPPED2Q15777 294 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TMEM196Q5HYL7 178 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 UNQ9370/PRO34162Q6UXP9 181 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TFAP2EQ6VUC0 442 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 PRSS35Q8N3Z0 413 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 CLEC1AQ8NC01 280 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 OR51E1Q8TCB6 317 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 TPSD1Q9BZJ3 242 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 SEMA6CQ9H3T2 930 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 KCNJ16Q9NPI9 418 aa11.67□□□□□ -0.54
MSH6-210ENST00000540021 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 TRIM77I1YAP6 450 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 NSA2O95478 260 aaKnown RBP11.66□□□□□ -0.54
MSH6-210ENST00000540021 DAOP14920 347 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 CBX5P45973 191 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 TFF2Q03403 129 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 CLEC9AQ6UXN8 241 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 Q6ZRG5 221 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 ISOC2Q96AB3 205 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 SERTAD2Q14140 314 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 P4HA3Q7Z4N8 544 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 ZNF565Q8N9K5 539 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 TLNRD1Q9H1K6 362 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 VSIG4Q9Y279 399 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 MRPS18BQ9Y676 258 aaKnown RBP11.66□□□□□ -0.54
MSH6-210ENST00000540021 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 LINC01553A4QN01 128 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 DNASE2O00115 360 aaPredicted RBP11.66□□□□□ -0.54
MSH6-210ENST00000540021 PNPP00491 289 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 OR13C7P0DN81 318 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 TMEM225BP0DP42 221 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 SLC6A8P48029 635 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 NPBWR1P48145 328 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 PRTGQ2VWP7 1150 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 MEX3BQ6ZN04 569 aaKnown RBP11.66□□□□□ -0.54
MSH6-210ENST00000540021 FAM57BQ71RH2 274 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 SLC36A1Q7Z2H8 476 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 CDC20BQ86Y33 519 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 SLC22A24Q8N4F4 322 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 TMEM234Q8WY98 164 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 DAZLQ92904 295 aaKnown RBP11.66□□□□□ -0.54
MSH6-210ENST00000540021 LCORQ96JN0 433 aaPredicted RBP11.66□□□□□ -0.54
MSH6-210ENST00000540021 SMCO4Q9NRQ5 59 aa11.66□□□□□ -0.54
MSH6-210ENST00000540021 MPDZO75970 2070 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 OR6C76A6NM76 312 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 ZNF354AO60765 605 aaPredicted RBP11.65□□□□□ -0.54
MSH6-210ENST00000540021 OMGP23515 440 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 BLVRBP30043 206 aaPredicted RBP11.65□□□□□ -0.54
MSH6-210ENST00000540021 MEOX2P50222 304 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 CAV2P51636 162 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 BIDP55957 195 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 ELAVL1Q15717 326 aaKnown RBP11.65□□□□□ -0.54
MSH6-210ENST00000540021 LINC01590Q5TEZ4 76 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 ZNF321PQ8N8H1 164 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 OR52N5Q8NH56 324 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 GPX8Q8TED1 209 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 SDHAF3Q9NRP4 125 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 HIF3AQ9Y2N7 669 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 OR5K4A6NMS3 321 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 LMX1BO60663 402 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 SFTA3P0C7M3 94 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 MPGP29372 298 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 SLC25A1P53007 311 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 TCTEX1D2Q8WW35 142 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 VSTM2LQ96N03 204 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 RSRP1Q9BUV0 290 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 METTL7AQ9H8H3 244 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 KCNIP3Q9Y2W7 256 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 FREM3P0C091 2139 aa11.65□□□□□ -0.54
MSH6-210ENST00000540021 ANAPC1Q9H1A4 1944 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 MTCL1Q9Y4B5 1905 aaKnown RBP11.65□□□□□ -0.55
MSH6-210ENST00000540021 NR0B2Q15466 257 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 VWA2Q5GFL6 755 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 EEF1A1P5Q5VTE0 462 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 SULF2Q8IWU5 870 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 OR4D6Q8NGJ1 314 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.55
MSH6-210ENST00000540021 SARGQ9BW04 601 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 PLA2G2FQ9BZM2 168 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 SLC19A3Q9BZV2 496 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 CNTD2Q9H8S5 307 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 FN3KRPQ9HA64 309 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 GDE1Q9NZC3 331 aa11.65□□□□□ -0.55
MSH6-210ENST00000540021 TCF20Q9UGU0 1960 aaKnown RBP11.65□□□□□ -0.55
MSH6-210ENST00000540021 OR2T1O43869 369 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 GGTLC2Q14390 218 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 EIF2S3LQ2VIR3 472 aaKnown RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 DEFB133Q30KQ1 61 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms