RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ASCC1Q8N9N2 400 aaKnown RBP13.42□□□□□ -0.26
DDB1-216ENST00000539739 OR10H4Q8NGA5 316 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 OR4F15Q8NGB8 312 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 OR2T27Q8NH04 317 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 AKR7LQ8NHP1 331 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 SPOCK3Q9BQ16 436 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 HDHD2Q9H0R4 259 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 WNT5BQ9H1J7 359 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 LIN7BQ9HAP6 207 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 NOX3Q9HBY0 568 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 NPAP1Q9NZP6 1156 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 CRIM1Q9NZV1 1036 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 EXOGQ9Y2C4 368 aaKnown RBP13.42□□□□□ -0.26
DDB1-216ENST00000539739 M0R1B8 84 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 XPNPEP2O43895 674 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 PRKACAP17612 351 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 CRYGSP22914 178 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 APLNRP35414 380 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 HCCSP53701 268 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ACTC1P68032 377 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ACTA1P68133 377 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 HIST1H3AP68431 136 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 RAB35Q15286 201 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ELFN2Q5R3F8 820 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 HIST2H3PS2Q5TEC6 136 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 LAIR2Q6ISS4 152 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ZNF774Q6NX45 483 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 KCTD18Q6PI47 426 aaPredicted RBP13.42□□□□□ -0.26
DDB1-216ENST00000539739 TMEM108Q6UXF1 575 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 CFAP77Q6ZQR2 320 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 HIST2H3AQ71DI3 136 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ZNF540Q8NDQ6 660 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 IL17RDQ8NFM7 739 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 OR1J2Q8NGS2 313 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 OR10Z1Q8NGY1 313 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 SMAP2Q8WU79 429 aaPredicted RBP13.42□□□□□ -0.26
DDB1-216ENST00000539739 CAPSLQ8WWF8 208 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ASB17Q8WXJ9 295 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 ABHD6Q9BV23 337 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 CNOT2Q9NZN8 540 aaKnown RBP13.42□□□□□ -0.26
DDB1-216ENST00000539739 POU2F3Q9UKI9 436 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 TPRKBQ9Y3C4 175 aa13.42□□□□□ -0.26
DDB1-216ENST00000539739 TRIM64A6NGJ6 449 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 CLDN25C9JDP6 229 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 SLC1A7O00341 560 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 IGLV1-44P01699 117 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 COX5BP10606 129 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 PSKH1P11801 424 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 ZNF14P17017 642 aaPredicted RBP13.41□□□□□ -0.26
DDB1-216ENST00000539739 ALOX5APP20292 161 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 PTAFRP25105 342 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 SLC15A1P46059 708 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 HTR5AP47898 357 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 ECH1Q13011 328 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 TAF13Q15543 124 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 RBM48Q5RL73 367 aaKnown RBP13.41□□□□□ -0.26
DDB1-216ENST00000539739 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
DDB1-216ENST00000539739 KCTD20Q7Z5Y7 419 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 ZNF786Q8N393 782 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 OR1F12Q8NHA8 337 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 ST7LQ8TDW4 575 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 GGHQ92820 318 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 SLAMF6Q96DU3 332 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 MAP6Q96JE9 813 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 ZNF75AQ96N20 296 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 TBX5Q99593 518 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 ATF6BQ99941 703 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 KCNS3Q9BQ31 491 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 CENPMQ9NSP4 180 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 RBMX2Q9Y388 322 aaKnown RBP13.41□□□□□ -0.26
DDB1-216ENST00000539739 ADGRG4Q8IZF6 3080 aa13.41□□□□□ -0.26
DDB1-216ENST00000539739 DAPL1A0PJW8 107 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 ISPDA4D126 451 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 ZNF878C9JN71 531 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 SYNGR3O43761 229 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 CECR9P0C854 216 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 PIPP12273 146 aaPredicted RBP13.4□□□□□ -0.26
DDB1-216ENST00000539739 STOMP27105 288 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 APEX1P27695 318 aaKnown RBP13.4□□□□□ -0.26
DDB1-216ENST00000539739 TMBIM6P55061 237 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 TPTEP56180 551 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 TBC1D28Q2M2D7 210 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 BEX5Q5H9J7 111 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 RHOUQ7L0Q8 258 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 ZNF584Q8IVC4 421 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 ACBD4Q8NC06 268 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 CPEB3Q8NE35 698 aaKnown RBP13.4□□□□□ -0.26
DDB1-216ENST00000539739 SLC30A7Q8NEW0 376 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 OR52I1Q8NGK6 324 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 MRPL48Q96GC5 212 aaKnown RBP13.4□□□□□ -0.26
DDB1-216ENST00000539739 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 COPS4Q9BT78 406 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 ESRP2Q9H6T0 727 aaKnown RBP13.4□□□□□ -0.26
DDB1-216ENST00000539739 FGF20Q9NP95 211 aaPredicted RBP13.4□□□□□ -0.26
DDB1-216ENST00000539739 INPP5EQ9NRR6 644 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 PSORS1C1Q9UIG5 152 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 COPS3Q9UNS2 423 aa13.4□□□□□ -0.26
DDB1-216ENST00000539739 PRR14LQ5THK1 2151 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms