RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CYP2R1Q6VVX0 501 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 KLHL36Q8N4N3 616 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 OR8G5Q8NG78 346 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 OR52E2Q8NGJ4 325 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 ZNF582Q96NG8 517 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-206ENST00000539320 PITX2Q99697 317 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 EGLN3Q9H6Z9 239 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 C7orf69Q9H7B7 122 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 PATZ1Q9HBE1 687 aaKnown RBP18.71■□□□□ 0.59
SCARB1-206ENST00000539320 ACTR3BQ9P1U1 418 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 PPIAL4EA0A075B759 164 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 PPIAL4CA0A0B4J2A2 164 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 IQCF6A8MYZ5 107 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 PPIAL4DF5H284 164 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 IFNL4K9M1U5 179 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 TNFRSF11BO00300 401 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 HLA-DQA2P01906 255 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 PPIAL4FP0DN26 164 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 RBMXP38159 391 aaKnown RBP18.7■□□□□ 0.58
SCARB1-206ENST00000539320 MNAT1P51948 309 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 ECH1Q13011 328 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 ZMYND11Q15326 602 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 SLC35F1Q5T1Q4 408 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 COLCA1Q6ZS62 124 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 OR2AJ1Q8NGZ0 328 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 OR13G1Q8NGZ3 307 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 NANPQ8TBE9 248 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 MEGF10Q96KG7 1140 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 ATF6BQ99941 703 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 BTBD10Q9BSF8 475 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 CDADC1Q9BWV3 514 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 C1QTNF5Q9BXJ0 243 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 OPN4Q9UHM6 478 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 CYB5R1Q9UHQ9 305 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 KCNG2Q9UJ96 466 aa18.7■□□□□ 0.58
SCARB1-206ENST00000539320 ACSM4P0C7M7 580 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 ZFP36P26651 326 aaKnown RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 GGT2P36268 569 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 MDH2P40926 338 aaKnown RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 MAGEA2P43356 314 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 SRP9P49458 86 aaKnown RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 HMGA2P52926 109 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 HILS1P60008 231 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 TRAP1Q12931 704 aaKnown RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 USP43Q70EL4 1123 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 LRRC28Q86X40 367 aaPredicted RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 LINC00471Q8N535 108 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 BHLHE23Q8NDY6 225 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 SLC30A2Q9BRI3 323 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 HCAR1Q9BXC0 346 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 WDR76Q9H967 626 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 GCM1Q9NP62 436 aa18.69■□□□□ 0.58
SCARB1-206ENST00000539320 PNRC2Q9NPJ4 139 aaKnown RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 MRPL22Q9NWU5 206 aaKnown RBP18.69■□□□□ 0.58
SCARB1-206ENST00000539320 F5H0A9 414 aaPredicted RBP18.68■□□□□ 0.58
SCARB1-206ENST00000539320 F5H5K5 113 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 TMEM178BH3BS89 294 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 BHLHE40O14503 412 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 FSHBP01225 129 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 SELEP16581 610 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 RSPO1Q2MKA7 263 aaPredicted RBP18.68■□□□□ 0.58
SCARB1-206ENST00000539320 MUC20Q8N307 709 aaPredicted RBP18.68■□□□□ 0.58
SCARB1-206ENST00000539320 OR4C15Q8NGM1 316 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 SUCNR1Q9BXA5 334 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 TRIM15Q9C019 465 aa18.68■□□□□ 0.58
SCARB1-206ENST00000539320 A8MXK9 166 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 MLNRO43193 412 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 CCNB2O95067 398 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 PYCR1P32322 319 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 ZNF770Q6IQ21 691 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-206ENST00000539320 RASSF6Q6ZTQ3 369 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 BPIFB2Q8N4F0 458 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 CYB561A3Q8NBI2 242 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 PROKR2Q8NFJ6 384 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 OR2T4Q8NH00 348 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 JMJD8Q96S16 334 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 SLC6A7Q99884 636 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 PLA2G12AQ9BZM1 189 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 MUC13Q9H3R2 512 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 MAGIXQ9H6Y5 334 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 TBC1D23Q9NUY8 699 aa18.67■□□□□ 0.58
SCARB1-206ENST00000539320 POLR3KQ9Y2Y1 108 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-206ENST00000539320 TCRBV5S2A0A599 114 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 CEACAM18A8MTB9 384 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 B2RBV5 119 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 H0YL77 283 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 LCATP04180 440 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 ZNF823P16415 610 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 TPTEP56180 551 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 PRSS12P56730 875 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 SEC61A1P61619 476 aaKnown RBP18.66■□□□□ 0.58
SCARB1-206ENST00000539320 MALLQ13021 153 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 ESCO2Q56NI9 601 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 LCN8Q6JVE9 175 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 ARHGAP24Q8N264 748 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 FITM2Q8N6M3 262 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 DEFB108BQ8NET1 73 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 OR8D4Q8NGM9 314 aa18.66■□□□□ 0.58
SCARB1-206ENST00000539320 ZNF420Q8TAQ5 688 aaPredicted RBP18.66■□□□□ 0.58
SCARB1-206ENST00000539320 MAP6Q96JE9 813 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms