RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 AKR7LQ8NHP1 331 aa1.72□□□□□ -2.13
CCDC7-209ENST00000539197 IP6K3Q96PC2 410 aa1.72□□□□□ -2.13
CCDC7-209ENST00000539197 ZNF317Q96PQ6 595 aaPredicted RBP1.72□□□□□ -2.13
CCDC7-209ENST00000539197 SHANK2-AS3Q9BTD1 123 aa1.72□□□□□ -2.13
CCDC7-209ENST00000539197 FGF20Q9NP95 211 aaPredicted RBP1.72□□□□□ -2.13
CCDC7-209ENST00000539197 DCAF16Q9NXF7 216 aa1.72□□□□□ -2.13
CCDC7-209ENST00000539197 STARD10Q9Y365 291 aa1.72□□□□□ -2.13
CCDC7-209ENST00000539197 PALLDQ8WX93 1383 aa1.72□□□□□ -2.13
CCDC7-209ENST00000539197 IGLV1-36A0A0B4J1U3 117 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 XKRY2A2RUG3 117 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 GABRR3A8MPY1 467 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 CRYGBP07316 175 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 UQCRFS1P1P0C7P4 283 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 LGALS3P17931 250 aaKnown RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 U2AF2P26368 475 aaKnown RBP eCLIP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 TALDO1P37837 337 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 RBM34P42696 430 aaKnown RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 NSG1P42857 185 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 TMED10P49755 219 aaKnown RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 TEX30Q5JUR7 227 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 GPR107Q5VW38 600 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 H3F3CQ6NXT2 135 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 NIPA1Q7RTP0 329 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 MRPL55Q7Z7F7 128 aaKnown RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 ZNF664Q8N3J9 261 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 NECAB1Q8N987 351 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 OR11H7Q8NGC8 314 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 KLF14Q8TD94 323 aaPredicted RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 TUBGCP3Q96CW5 907 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 RHOXF2Q9BQY4 288 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 GGTLC1Q9BX51 225 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 ANGPTL4Q9BY76 406 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 ILKAPQ9H0C8 392 aaPredicted RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 NEK6Q9HC98 313 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 TMEM9BQ9NQ34 198 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 SLC2A8Q9NY64 477 aa1.71□□□□□ -2.14
CCDC7-209ENST00000539197 SAMHD1Q9Y3Z3 626 aaKnown RBP1.71□□□□□ -2.14
CCDC7-209ENST00000539197 ARPC4-TTLL3A0A0A6YYG9 625 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 IGHV1-3A0A0C4DH29 117 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 OR5H1A6NKK0 313 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 NDUFC2-KCTD14E9PQ53 114 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 AP3B1O00203 1094 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 RAB29O14966 203 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 HMMRO75330 724 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 HNRNPH3P31942 346 aaKnown RBP1.7□□□□□ -2.14
CCDC7-209ENST00000539197 NAA10P41227 235 aaPredicted RBP1.7□□□□□ -2.14
CCDC7-209ENST00000539197 STXBP1P61764 594 aaKnown RBP1.7□□□□□ -2.14
CCDC7-209ENST00000539197 RPL23P62829 140 aaKnown RBP1.7□□□□□ -2.14
CCDC7-209ENST00000539197 BEX3Q00994 111 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 PPIDQ08752 370 aaKnown RBP1.7□□□□□ -2.14
CCDC7-209ENST00000539197 PRAMEF5Q5TYX0 476 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 UBE2UQ5VVX9 321 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 PRAMEF6Q5VXH4 476 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 MBOAT1Q6ZNC8 495 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 FAM228AQ86W67 206 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 OR10AD1Q8NGE0 317 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 EEF1AKMT3Q96AZ1 226 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 WDR34Q96EX3 536 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 TM2D3Q9BRN9 247 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 CHCHD7Q9BUK0 85 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 ZSCAN16Q9H4T2 348 aaPredicted RBP1.7□□□□□ -2.14
CCDC7-209ENST00000539197 NMRK1Q9NWW6 199 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 HRASLS2Q9NWW9 162 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 PISDQ9UG56 409 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 USP47Q96K76 1375 aa1.7□□□□□ -2.14
CCDC7-209ENST00000539197 CCDC169A6NNP5 214 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 KRBOX1C9JBD0 128 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 H0Y8G0 127 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 PLIN3O60664 434 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 DEDDO75618 318 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 ZNF24P17028 368 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 ZNF43P17038 809 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 MPV17P39210 176 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 TNNT2P45379 298 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-209ENST00000539197 DMC1Q14565 340 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 PPM1LQ5SGD2 360 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 RNASEKQ6P5S7 137 aaKnown RBP1.69□□□□□ -2.14
CCDC7-209ENST00000539197 TMEM107Q6UX40 140 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 TAS2R42Q7RTR8 314 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 CBR4Q8N4T8 237 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 OR5T1Q8NG75 326 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 OR9K2Q8NGE7 335 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 OR56B2PQ8NGI1 322 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 OR1J4Q8NGS1 313 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 RAB3IL1Q8TBN0 382 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 TPD52L3Q96J77 140 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 SLC29A1Q99808 456 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 TMEM27Q9HBJ8 222 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 LGALS13Q9UHV8 139 aa1.69□□□□□ -2.14
CCDC7-209ENST00000539197 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 GOLGA8OA6NCC3 632 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 SMCO2A6NFE2 343 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CEACAM18A8MTB9 384 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 GOLGA8NF8WBI6 632 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 H7C417 338 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ERLIN1O75477 346 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 CIB2O75838 187 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 GLSO94925 669 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ARG1P05089 322 aa1.68□□□□□ -2.14
CCDC7-209ENST00000539197 ANXA5P08758 320 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms