RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 POM121L2Q96KW2 1035 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 CITED4Q96RK1 184 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 C1orf50Q9BV19 199 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 PRSS22Q9GZN4 317 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 MUC13Q9H3R2 512 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 ASIC5Q9NY37 505 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 ONECUT1Q9UBC0 465 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 RIMS3Q9UJD0 308 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 CCL27Q9Y4X3 112 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
USP28-205ENST00000537706 A0A087WUJ7 227 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 TCRBV3S1A0A5B6 114 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 MS4A18H0YCH9 400 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 NME4O00746 187 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 NDUFA2O43678 99 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 OR6A2O95222 327 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 NPPAP01160 153 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 HLA-DOBP13765 273 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 KITLGP21583 273 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 CHI3L1P36222 383 aaPredicted RBP7.48□□□□□ -1.21
USP28-205ENST00000537706 PSMB10P40306 273 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 POLR2JP52435 117 aaKnown RBP7.48□□□□□ -1.21
USP28-205ENST00000537706 BLMHQ13867 455 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 MS4A18Q3C1V0 323 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 RFTN2Q52LD8 501 aaPredicted RBP7.48□□□□□ -1.21
USP28-205ENST00000537706 TMEM255AQ5JRV8 349 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 NHLRC1Q6VVB1 395 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 ARPINQ7Z6K5 226 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 PXKQ7Z7A4 578 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 SPATA24Q86W54 205 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 LRRC18Q8N456 261 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 FAM156AQ8NDB6 213 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 OR6S1Q8NH40 331 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 OR6X1Q8NH79 312 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 COQ8BQ96D53 544 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 COG8Q96MW5 612 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 INPP5EQ9NRR6 644 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 SERTAD4Q9NUC0 356 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 HIF3AQ9Y2N7 669 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 LSM4Q9Y4Z0 139 aaKnown RBP7.48□□□□□ -1.21
USP28-205ENST00000537706 A0A1W2PRD5 423 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 A0A1W2PRF3 423 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 A0A1W2PRM7 423 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 CCDC154A6NI56 674 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 ADAM20O43506 726 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 LHBP01229 141 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 PRPS1L1P21108 318 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 VDAC2P45880 294 aaPredicted RBP7.48□□□□□ -1.21
USP28-205ENST00000537706 RGS6P49758 472 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 UFM1P61960 85 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 CD83Q01151 205 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 ACSM1Q08AH1 577 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 AANATQ16613 207 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 SATL1Q86VE3 508 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 DPP10Q8N608 796 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 C10orf53Q8N6V4 93 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 OR13G1Q8NGZ3 307 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 TAAR8Q969N4 342 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 C4orf45Q96LM5 186 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 TEX37Q96LM6 180 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 ZNF702PQ9H963 129 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 C12orf10Q9HB07 376 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 SELENONQ9NZV5 590 aa7.48□□□□□ -1.21
USP28-205ENST00000537706 TRBV23-1A0A0A0MS06 115 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 CDHR4A6H8M9 788 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 HPRP00739 348 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 NR2F1P10589 423 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 IL12AP29459 219 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 GP2P55259 537 aaKnown RBP7.47□□□□□ -1.21
USP28-205ENST00000537706 NFYCQ13952 458 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 PGS1Q32NB8 556 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 KHDC1LQ5JSQ8 128 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 INTS11Q5TA45 600 aaKnown RBP7.47□□□□□ -1.21
USP28-205ENST00000537706 NCR3LG1Q68D85 454 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 LCN8Q6JVE9 175 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 Q6ZR03 302 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 BTN2A1Q7KYR7 527 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 LSRQ86X29 649 aaPredicted RBP7.47□□□□□ -1.21
USP28-205ENST00000537706 DHFR2Q86XF0 187 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 SLC15A3Q8IY34 581 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 OR5AU1Q8NGC0 362 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 ERGIC1Q969X5 290 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 VPS33AQ96AX1 596 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 CMBLQ96DG6 245 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 LRGUKQ96M69 825 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 DMRTB1Q96MA1 342 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 NR1H4Q96RI1 486 aaPredicted RBP7.47□□□□□ -1.21
USP28-205ENST00000537706 ZNF607Q96SK3 696 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 CMTM6Q9NX76 183 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 ZNF232Q9UNY5 417 aa7.47□□□□□ -1.21
USP28-205ENST00000537706 AQP12BA6NM10 295 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 SLC25A17O43808 307 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 ABHD16AO95870 558 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 MMP7P09237 267 aaPredicted RBP7.46□□□□□ -1.21
USP28-205ENST00000537706 G6PDP11413 515 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 ATP6V1B2P21281 511 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 RPS4Y1P22090 263 aaKnown RBP7.46□□□□□ -1.21
USP28-205ENST00000537706 SAA4P35542 130 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 AQP4P55087 323 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms