RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 DEGS2Q6QHC5 323 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 KCTD20Q7Z5Y7 419 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 MRPL48Q96GC5 212 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 KCNJ15Q99712 375 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 NAA50Q9GZZ1 169 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 NPAP1Q9NZP6 1156 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF319Q9P2F9 582 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 R4GMQ9 66 aa13.6□□□□□ -0.23
SFSWAP-206ENST00000537582 FAM208BQ5VWN6 2430 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 TMEM269A0A1B0GVZ9 245 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 CPEP16870 476 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 CCNOP22674 350 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 NR4A1P22736 598 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 STOMP27105 288 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 OTX1P32242 354 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 TTKP33981 857 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 RGS6P49758 472 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 PSMA6P60900 246 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 RPS25P62851 125 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 GRB2P62993 217 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 ACSM1Q08AH1 577 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 INSL4Q14641 139 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 CDK5R1Q15078 307 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 TIMM23BQ5SRD1 257 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 SEZ6L2Q6UXD5 910 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 PHC2Q8IXK0 858 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 RDH10Q8IZV5 341 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF283Q8N7M2 679 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 IL17RDQ8NFM7 739 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 STEAP2Q8NFT2 490 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 OR13C5Q8NGS8 318 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 OR2G2Q8NGZ5 317 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 TMEM203Q969S6 136 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 ZC3HAV1LQ96H79 300 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 C4orf45Q96LM5 186 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 DCLRE1CQ96SD1 692 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 COQ7Q99807 217 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 PDCD1LG2Q9BQ51 273 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 WACQ9BTA9 647 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 HDHD5Q9BXW7 423 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 G6PC2Q9NQR9 355 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 RSL24D1Q9UHA3 163 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 PRR14LQ5THK1 2151 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 ADGRG4Q8IZF6 3080 aa13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 DIDO1Q9BTC0 2240 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-206ENST00000537582 C5orf49A4QMS7 147 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 LOC110117498-PIK3R3F6TDL0 507 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 M0R135 149 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 OGG1O15527 345 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 THBDP07204 575 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 ACSM4P0C7M7 580 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 CBR1P16152 277 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC6A9P48067 706 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF83P51522 516 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 TPBGQ13641 420 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 ALKBH1Q13686 389 aaKnown RBP13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 FBXL19-AS1Q494R0 122 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 MTFR2Q6P444 385 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 FAM57BQ71RH2 274 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 RHOUQ7L0Q8 258 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 PRSS45Q7RTY3 260 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 GPR141Q7Z602 305 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 CATSPERDQ86XM0 798 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 UFD1Q92890 307 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF799Q96GE5 643 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 POM121L2Q96KW2 1035 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 PGLYRP3Q96LB9 341 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 DOK1Q99704 481 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 ISYNA1Q9NPH2 558 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 AMDHD2Q9Y303 409 aa13.58□□□□□ -0.23
SFSWAP-206ENST00000537582 IGHV1-18A0A0C4DH31 117 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 TRBV2A0A0J9YWF9 115 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 CCDC160A6NGH7 325 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 OR4C45A6NMZ5 311 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 ZFPL1O95159 310 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 SERPINA5P05154 406 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 ANXA2P07355 339 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 HOXB1P14653 301 aaPredicted RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 CD36P16671 472 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 MAGEB1P43366 347 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 TGM4P49221 684 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 GDI2P50395 445 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 BDH1Q02338 343 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 PLP2Q04941 152 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 TFF3Q07654 80 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 PPA1Q15181 289 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 SNAI3Q3KNW1 292 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 GPR107Q5VW38 600 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 RPL22L1Q6P5R6 122 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 DPPA2Q7Z7J5 298 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 CCDC36Q8IYA8 594 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 SLC30A7Q8NEW0 376 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 OR10AC1Q8NH08 325 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 RPS4Y2Q8TD47 263 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 GHSRQ92847 366 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 RPL3LQ92901 407 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 RNASE6Q93091 150 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms