RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TCEAL3Q969E4 200 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 JSRP1Q96MG2 331 aaPredicted RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 NUDT16L1Q9BRJ7 211 aaKnown RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 UTP23Q9BRU9 249 aaKnown RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 C20orf85Q9H1P6 137 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 SMOC1Q9H4F8 434 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 P4HTMQ9NXG6 502 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 PAQR5Q9NXK6 330 aaPredicted RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 B3GNT2Q9NY97 397 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 ING4Q9UNL4 249 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 TRAV6A0A075B6T7 132 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 TSPAN9O75954 239 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 WNT11O96014 354 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 MT-ND4P03905 459 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 CD59P13987 128 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 RAB3AP20336 220 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 GSK3AP49840 483 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 MECP2P51608 486 aaKnown RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 TNK1Q13470 666 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 RNASE12Q5GAN4 147 aaKnown RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 SLC25A25Q6KCM7 469 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 CORO6Q6QEF8 472 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 BEST3Q8N1M1 668 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 GALNT11Q8NCW6 608 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 OR9K2Q8NGE7 335 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 RELTQ969Z4 430 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 GPN1Q9HCN4 374 aaPredicted RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 FBLN5Q9UBX5 448 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 RAB22AQ9UL26 194 aa12.04□□□□□ -0.48
SMG6-203ENST00000536871 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
SMG6-203ENST00000536871 TMEM272A0A1B0GTI8 110 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 A0A1B0GUH1 482 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 H0YC42 278 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 P2RY10O00398 339 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 EIF1AYO14602 144 aaKnown RBP12.03□□□□□ -0.48
SMG6-203ENST00000536871 BPNT1O95861 308 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 ANXA3P12429 323 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 CNR1P21554 472 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 CCL1P22362 96 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 AVPR2P30518 371 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 FAPQ12884 760 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 DOK3Q7L591 496 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 TIPARPQ7Z3E1 657 aaKnown RBP12.03□□□□□ -0.48
SMG6-203ENST00000536871 WDFY1Q8IWB7 410 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 PLPP7Q8NBV4 271 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 OR1M1Q8NGA1 313 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 DMRTB1Q96MA1 342 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 FYTTD1Q96QD9 318 aaKnown RBP12.03□□□□□ -0.48
SMG6-203ENST00000536871 ATG5Q9H1Y0 275 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 METTL17Q9H7H0 456 aaPredicted RBP12.03□□□□□ -0.48
SMG6-203ENST00000536871 TECTAO75443 2155 aa12.03□□□□□ -0.48
SMG6-203ENST00000536871 CIB4A0PJX0 185 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ZNF814B7Z6K7 855 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 LDLRAD4O15165 306 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 DHHO43323 396 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 OPN1LWP04000 364 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 IL5P05113 134 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ZNF806P0C7X5 589 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ZNF20P17024 532 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ENPP1P22413 925 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 OTPQ5XKR4 325 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 CARD17Q5XLA6 110 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ASPHD2Q6ICH7 369 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ZNF529Q6P280 563 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ZNF813Q6ZN06 617 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 CFAP77Q6ZQR2 320 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 JAGN1Q8N5M9 183 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 OR10S1Q8NGN2 331 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 OR14L1PQ8NHC6 308 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 PPP1R14AQ96A00 147 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 C10orf35Q96D05 121 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 PCNX3Q9H6A9 2034 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 ASH2LQ9UBL3 628 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 KLK11Q9UBX7 282 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 SLC5A6Q9Y289 635 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 AUP1Q9Y679 476 aa12.02□□□□□ -0.48
SMG6-203ENST00000536871 TRIOO75962 3097 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 A8MV72 311 aaPredicted RBP12.02□□□□□ -0.49
SMG6-203ENST00000536871 SNRPGP15A8MWD9 76 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 RAD1O60671 282 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 NOS1APO75052 506 aaPredicted RBP12.02□□□□□ -0.49
SMG6-203ENST00000536871 ZNF780AO75290 641 aaPredicted RBP12.02□□□□□ -0.49
SMG6-203ENST00000536871 NDUFB6O95139 128 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 MT-CO3P00414 261 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 ALDOBP05062 364 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 LPLP06858 475 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 AKAIN1P0CW23 69 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 GNALP38405 381 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 HTR2BP41595 481 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 EIF1AXP47813 144 aaKnown RBP12.02□□□□□ -0.49
SMG6-203ENST00000536871 CCR6P51684 374 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 CLDN6P56747 220 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 MRPS34P82930 218 aaKnown RBP12.02□□□□□ -0.49
SMG6-203ENST00000536871 FOXK1P85037 733 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 BAMBIQ13145 260 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 RBMS2Q15434 407 aaKnown RBP12.02□□□□□ -0.49
SMG6-203ENST00000536871 LYPD6Q86Y78 171 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms