RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SNAI3Q3KNW1 292 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 ZNF718Q3SXZ3 478 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 NXNL2Q5VZ03 156 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 RFLNBQ8N5W9 214 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 ZNF525Q8N782 197 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 OTOSQ8NHW6 89 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 FAM81AQ8TBF8 368 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 RNF133Q8WVZ7 376 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 ZNF582Q96NG8 517 aaPredicted RBP15.28■□□□□ 0.04
DDX55-204ENST00000536079 DCLRE1CQ96SD1 692 aaKnown RBP15.28■□□□□ 0.04
DDX55-204ENST00000536079 COPS4Q9BT78 406 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 PRRG3Q9BZD7 231 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 DYNLRB1Q9NP97 96 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 DNAJC27Q9NZQ0 273 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 ORC6Q9Y5N6 252 aa15.28■□□□□ 0.04
DDX55-204ENST00000536079 M0R135 149 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 M0R233 179 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 ALOX5APP20292 161 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 OPRL1P41146 370 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 MMP15P51511 669 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 EFNA4P52798 201 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 HNRNPA0Q13151 305 aaKnown RBP15.27■□□□□ 0.04
DDX55-204ENST00000536079 TNK1Q13470 666 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 GGTLC2Q14390 218 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 CLEC12BQ2HXU8 276 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 ARL9Q6T311 187 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 SHFQ7M4L6 423 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 SLC16A9Q7RTY1 509 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 THEM6Q8WUY1 208 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 ZNF799Q96GE5 643 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 TMUB1Q9BVT8 246 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 ADGRL4Q9HBW9 690 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 DLL4Q9NR61 685 aa15.27■□□□□ 0.04
DDX55-204ENST00000536079 ZSCAN5BA6NJL1 495 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 ZNF878C9JN71 531 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 LYNX1G3V0Z9 82 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 NCR1O76036 304 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 APOL3O95236 402 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 LYNX1P0DP58 116 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 BMP4P12644 408 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 GCH1P30793 250 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 RBMXP38159 391 aaKnown RBP15.26■□□□□ 0.03
DDX55-204ENST00000536079 MAGEB1P43366 347 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 NUDT6P53370 316 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 NKPD1Q17RQ9 610 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 SPRNQ5BIV9 151 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 LURAP1LQ8IV03 231 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 OR8J1Q8NGP2 316 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 APOBEC3DQ96AK3 386 aaPredicted RBP15.26■□□□□ 0.03
DDX55-204ENST00000536079 KCNJ15Q99712 375 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 TTTY10Q9BZA0 68 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 FAM118AQ9NWS6 357 aa15.26■□□□□ 0.03
DDX55-204ENST00000536079 IGHV4-30-2A0A087WSY4 118 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 PSMD9O00233 223 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 MAGEB4O15481 346 aaPredicted RBP15.25■□□□□ 0.03
DDX55-204ENST00000536079 LILRA1O75019 489 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 ENTPD6O75354 484 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 HPXP02790 462 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 LCATP04180 440 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 GABRB1P18505 474 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 RGS6P49758 472 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 TPTEP56180 551 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 CDC42P60953 191 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 LRRN1Q6UXK5 716 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 Q6ZR03 302 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 PRSS45Q7RTY3 260 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 SPTSSAQ969W0 71 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 HAVCR1Q96D42 359 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 YIPF3Q9GZM5 350 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 BARX1Q9HBU1 254 aaPredicted RBP15.25■□□□□ 0.03
DDX55-204ENST00000536079 MSL2Q9HCI7 577 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 SLCO1C1Q9NYB5 712 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 H2AFY2Q9P0M6 372 aaPredicted RBP15.25■□□□□ 0.03
DDX55-204ENST00000536079 ZNF319Q9P2F9 582 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 PURGQ9UJV8 347 aaKnown RBP15.25■□□□□ 0.03
DDX55-204ENST00000536079 N6AMT1Q9Y5N5 214 aa15.25■□□□□ 0.03
DDX55-204ENST00000536079 LOC100130705A0A1B0GUX0 176 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 C17orf100A8MU93 164 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 H3BSA7 217 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 H7C1Q1 480 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 CASQ2O14958 399 aaPredicted RBP15.24■□□□□ 0.03
DDX55-204ENST00000536079 LYNP07948 512 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 KITLGP21583 273 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 HTR1FP30939 366 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 SLC6A9P48067 706 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 CX3CR1P49238 355 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 SELENOVP59797 346 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 TAF13Q15543 124 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 GLYATL3Q5SZD4 288 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 OGFRL1Q5TC84 451 aaPredicted RBP15.24■□□□□ 0.03
DDX55-204ENST00000536079 LCN1P1Q5VSP4 162 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 OR2T2Q6IF00 324 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 UNQ6126/PRO20091Q6UXV3 157 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 FBXW12Q6X9E4 464 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 C1orf174Q8IYL3 243 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 ENTHD1Q8IYW4 607 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 OR5AS1Q8N127 324 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 ZNF454Q8N9F8 522 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 MAPK1IP1LQ8NDC0 245 aa15.24■□□□□ 0.03
DDX55-204ENST00000536079 OR2AE1Q8NHA4 323 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms