RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MRGPRX4Q96LA9 322 aa11.72□□□□□ -0.53
LDLR-203ENST00000535915 C1orf198Q9H425 327 aa11.72□□□□□ -0.53
LDLR-203ENST00000535915 CNTD2Q9H8S5 307 aa11.72□□□□□ -0.53
LDLR-203ENST00000535915 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
LDLR-203ENST00000535915 B3GAT1Q9P2W7 334 aa11.72□□□□□ -0.53
LDLR-203ENST00000535915 CYB5R1Q9UHQ9 305 aa11.72□□□□□ -0.53
LDLR-203ENST00000535915 GDF2Q9UK05 429 aaPredicted RBP11.72□□□□□ -0.53
LDLR-203ENST00000535915 METTL21EPA6NDL7 271 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 SYT7O43581 403 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 OR2J2O76002 312 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 OR4E1P0C645 316 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 RRASP10301 218 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 CXCL12P48061 93 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 CLRN1P58418 232 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 INPP5JQ15735 1006 aaPredicted RBP11.71□□□□□ -0.53
LDLR-203ENST00000535915 SCGB2B2Q4G0G5 96 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 SFRP5Q5T4F7 317 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 SHEQ5VZ18 495 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 GPAT4Q86UL3 456 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 FBXW5Q969U6 566 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 SLC25A21Q9BQT8 299 aaPredicted RBP11.71□□□□□ -0.53
LDLR-203ENST00000535915 UQCC2Q9BRT2 126 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 PBOV1Q9GZY1 135 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 WNT16Q9UBV4 365 aa11.71□□□□□ -0.53
LDLR-203ENST00000535915 A0A1W2PNV4 684 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 HMSDA8MTL9 139 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 ZFAND5O76080 213 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 PMS2P2O95744 297 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 CSN2P05814 226 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 ZNF28P17035 718 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 MSX1P28360 303 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 LAP3P28838 519 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 CCL7P80098 99 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 NHLRC3Q5JS37 347 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 TMEM81Q6P7N7 255 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 ZNF813Q6ZN06 617 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 TMUB2Q71RG4 321 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 ZNF584Q8IVC4 421 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 UEVLDQ8IX04 471 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 CDH26Q8IXH8 852 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 BPIFB2Q8N4F0 458 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 OR52N4Q8NGI2 321 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 PTX4Q96A99 478 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 ALX4Q9H161 411 aaPredicted RBP11.71□□□□□ -0.54
LDLR-203ENST00000535915 KLK13Q9UKR3 277 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 POLR1DQ9Y2S0 133 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 WIF1Q9Y5W5 379 aa11.71□□□□□ -0.54
LDLR-203ENST00000535915 A0A1W2PQM1 296 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 RP2O75695 350 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 MELTFP08582 738 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 GMFBP60983 142 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 HLXQ14774 488 aaPredicted RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 LYPD6Q86Y78 171 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 OR4S1Q8NGB4 309 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 POC1BQ8TC44 478 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 FAM46BQ96A09 425 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 ADAT3Q96EY9 351 aaPredicted RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 ARL6Q9H0F7 186 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 RAB22AQ9UL26 194 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 TNRC18O15417 2968 aaPredicted RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 A0A1W2PNR3 127 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 ETV2O00321 342 aaPredicted RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 DCNP07585 359 aaKnown RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 RAB6AP20340 208 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 PTGDSP41222 190 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 CAPZA1P52907 286 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 GPR85P60893 370 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 FOXK1P85037 733 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 RIPPLY1Q0D2K3 151 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 NR0B2Q15466 257 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 MPPED2Q15777 294 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 B3GNTL1Q67FW5 361 aaPredicted RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 C3orf33Q6P1S2 294 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 CFAP77Q6ZQR2 320 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 CHST4Q8NCG5 386 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 OR1M1Q8NGA1 313 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 OR10S1Q8NGN2 331 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 RNF138Q8WVD3 245 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 MARC2Q969Z3 335 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 OR5B2Q96R09 309 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 MRPL13Q9BYD1 178 aaKnown RBP11.7□□□□□ -0.54
LDLR-203ENST00000535915 PTGES2Q9H7Z7 377 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 FANCFQ9NPI8 374 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 RDH8Q9NYR8 311 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 RHBDD3Q9Y3P4 386 aa11.7□□□□□ -0.54
LDLR-203ENST00000535915 IGHV5-10-1A0A0J9YXX1 117 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 K7ESF4 209 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 HSD11B1P28845 292 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 NKPD1Q17RQ9 610 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 SLC25A53Q5H9E4 307 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 RAB12Q6IQ22 244 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 LCN10Q6JVE6 187 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 CD163Q86VB7 1156 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 C12orf45Q8N5I9 185 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms