RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 ZNF205O95201 554 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 NCK1P16333 377 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 PRTN3P24158 256 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 MSX2P35548 267 aaPredicted RBP17.28■□□□□ 0.36
LTBR-205ENST00000535739 FOXL1Q12952 345 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 GPR139Q6DWJ6 353 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
LTBR-205ENST00000535739 FAM162AQ96A26 154 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 GPX7Q96SL4 187 aaPredicted RBP17.28■□□□□ 0.36
LTBR-205ENST00000535739 GPA33Q99795 319 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 ZNF747Q9BV97 191 aa17.28■□□□□ 0.36
LTBR-205ENST00000535739 IGHV3-64DA0A0J9YX35 117 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 H0YL77 283 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 CYB5R3P00387 301 aaPredicted RBP17.27■□□□□ 0.36
LTBR-205ENST00000535739 H1F0P07305 194 aaKnown RBP17.27■□□□□ 0.36
LTBR-205ENST00000535739 WNT2P09544 360 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 CD80P33681 288 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 CDKN2AP42771 156 aaKnown RBP17.27■□□□□ 0.36
LTBR-205ENST00000535739 OMPP47874 163 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 RGS6P49758 472 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 FXYD6P3P58550 94 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 MEP1BQ16820 701 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 FGD3Q5JSP0 725 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 FBXW12Q6X9E4 464 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 MUC20Q8N307 709 aaPredicted RBP17.27■□□□□ 0.36
LTBR-205ENST00000535739 OR8G5Q8NG78 346 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 RSRC1Q96IZ7 334 aaKnown RBP17.27■□□□□ 0.36
LTBR-205ENST00000535739 MEGF10Q96KG7 1140 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 TSSK2Q96PF2 358 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 OR5V1Q9UGF6 321 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 POLR1DQ9Y2S0 133 aa17.27■□□□□ 0.36
LTBR-205ENST00000535739 IGHV3OR16-10A0A075B7F0 116 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 A0A1W2PRQ8 180 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 J3QW42 95 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 TMPRSS2O15393 492 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 CENPAP49450 140 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 PAX8Q06710 450 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 BAMBIQ13145 260 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 DGCR6Q14129 220 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 TRIM25Q14258 630 aaKnown RBP17.26■□□□□ 0.35
LTBR-205ENST00000535739 SEC23BQ15437 767 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 KCNMB1Q16558 191 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 SLC27A4Q6P1M0 643 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 ADCK1Q86TW2 530 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 OR5L1Q8NGL2 311 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 OR13G1Q8NGZ3 307 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 UTP4Q969X6 686 aaKnown RBP17.26■□□□□ 0.35
LTBR-205ENST00000535739 RAB3IPQ96QF0 476 aaPredicted RBP17.26■□□□□ 0.35
LTBR-205ENST00000535739 SSBP3Q9BWW4 388 aaPredicted RBP17.26■□□□□ 0.35
LTBR-205ENST00000535739 TMEM165Q9HC07 324 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 NDUFAF4Q9P032 175 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 ATPIF1Q9UII2 106 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 LRCH1Q9Y2L9 728 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 LHFPL6Q9Y693 200 aa17.26■□□□□ 0.35
LTBR-205ENST00000535739 TRBV4-1A0A0J9YWV2 114 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 IFNL4K9M1U5 179 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 DCTN6O00399 190 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 MLNRO43193 412 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 GMNNO75496 209 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 IGHV4-38-2P0DP08 117 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 RPS2P15880 293 aaKnown RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 PAX2Q02962 417 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 DBPQ10586 325 aaPredicted RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 CORO6Q6QEF8 472 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 DPY19L2P2Q6ZN68 376 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 MOGAT3Q86VF5 341 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 BHLHE23Q8NDY6 225 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 GJC3Q8NFK1 279 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 OR52E2Q8NGJ4 325 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 APOBEC3DQ96AK3 386 aaPredicted RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 CCDC124Q96CT7 223 aaKnown RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 ZNF582Q96NG8 517 aaPredicted RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 MS4A7Q9GZW8 240 aaPredicted RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 WDR76Q9H967 626 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 AURKCQ9UQB9 309 aa17.25■□□□□ 0.35
LTBR-205ENST00000535739 FAM32AQ9Y421 112 aaKnown RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 SOX21Q9Y651 276 aaPredicted RBP17.25■□□□□ 0.35
LTBR-205ENST00000535739 UNC119BA6NIH7 251 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 ANKRD65E5RJM6 399 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 F5H5P2 479 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 DIRAS1O95057 198 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 TXNDC12O95881 172 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 RHCEP18577 417 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 SRP9P49458 86 aaKnown RBP17.24■□□□□ 0.35
LTBR-205ENST00000535739 RPS6KA3P51812 740 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 PRSS12P56730 875 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 HIST1H3AP68431 136 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 MS4A2Q01362 244 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 TRAP1Q12931 704 aaKnown RBP17.24■□□□□ 0.35
LTBR-205ENST00000535739 HIST2H3PS2Q5TEC6 136 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 GLYATQ6IB77 296 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 SHISA2Q6UWI4 295 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 HIST2H3AQ71DI3 136 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 JAZF1Q86VZ6 243 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 KLBQ86Z14 1044 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 COQ7Q99807 217 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 SLC30A2Q9BRI3 323 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 HDHD2Q9H0R4 259 aa17.24■□□□□ 0.35
LTBR-205ENST00000535739 ZMAT3Q9HA38 289 aaKnown RBP17.24■□□□□ 0.35
LTBR-205ENST00000535739 RPS6KA6Q9UK32 745 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms