RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 A0A1W2PPL8 197 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 NDUFA2O43678 99 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 SHOX2O60902 331 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 MMP9P14780 707 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 CRABP1P29762 137 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 OTX1P32242 354 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 PMELP40967 661 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 OMPP47874 163 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 ERFP50548 548 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 MAB21L1Q13394 359 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 CLEC12AQ5QGZ9 265 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 WDR25Q64LD2 544 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 HACD2Q6Y1H2 254 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 ZBTB46Q86UZ6 589 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 OR13C2Q8NGS9 318 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 OR4F5Q8NH21 305 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 ZNF570Q96NI8 536 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 HOPXQ9BPY8 73 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 SYT4Q9H2B2 425 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 CMTM6Q9NX76 183 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 ARMCX1Q9P291 453 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 KAAG1Q9UBP8 84 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 NOP16Q9Y3C1 178 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 LHFPL6Q9Y693 200 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 ENPP4Q9Y6X5 453 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
CLSTN3-206ENST00000535668 P2RY10O00398 339 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 RER1O15258 196 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 CLPXO76031 633 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 RPS2P15880 293 aaKnown RBP9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 PITPNBP48739 271 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 GNB2P62879 340 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 KRR1Q13601 381 aaKnown RBP9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 LRRC23Q53EV4 343 aaPredicted RBP9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 IFI44LQ53G44 452 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 CD276Q5ZPR3 534 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 ZNF730Q6ZMV8 503 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 VTCN1Q7Z7D3 282 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 IGFN1Q86VF2 1251 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 SLC26A10Q8NG04 563 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 OR8B3Q8NGG8 313 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 RP9Q8TA86 221 aaKnown RBP9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 C7orf34Q96L11 122 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 OR8B2Q96RD0 313 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 NUDT16L1Q9BRJ7 211 aaKnown RBP9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 TMEM120AQ9BXJ8 343 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 NUAK2Q9H093 628 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 BEX1Q9HBH7 125 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 TRIM36Q9NQ86 728 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 TMEM100Q9NV29 134 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 CLN8Q9UBY8 286 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 CYB5R1Q9UHQ9 305 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 KCNG2Q9UJ96 466 aa9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 COA3Q9Y2R0 106 aaPredicted RBP9.33□□□□□ -0.92
CLSTN3-206ENST00000535668 ZNF879B4DU55 563 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 J3KTA2 159 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 ENSAO43768 121 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 IDH3BO43837 385 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 GMDSO60547 372 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 SLC16A7O60669 478 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 ACSM4P0C7M7 580 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 RHCEP18577 417 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 MDKP21741 143 aaPredicted RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 RPL4P36578 427 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 RELBQ01201 579 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 DEFA6Q01524 100 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 GK2Q14410 553 aaPredicted RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 HLXQ14774 488 aaPredicted RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 PDCD1Q15116 288 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 KCNJ8Q15842 424 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 OR2T2Q6IF00 324 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 DNM1P34Q6PK57 102 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 TBPL2Q6SJ96 375 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 METAP1DQ6UB28 335 aaPredicted RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 PTCHD4Q6ZW05 846 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 RHOUQ7L0Q8 258 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 LDLRAD3Q86YD5 345 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 ATG16L2Q8NAA4 619 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 OR10S1Q8NGN2 331 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 SSMEM1Q8WWF3 244 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 SLC7A6Q92536 515 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 DYRK2Q92630 601 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 TPD52L3Q96J77 140 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 CCDC134Q9H6E4 229 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 PNRC2Q9NPJ4 139 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 NDUFAF4Q9P032 175 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 ABCD2Q9UBJ2 740 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 CD300AQ9UGN4 299 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 RPS6KA6Q9UK32 745 aa9.32□□□□□ -0.92
CLSTN3-206ENST00000535668 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 FAM181BA6NEQ2 426 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 C22orf46C9J442 243 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 H7C1C5 153 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 DCTN6O00399 190 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 CXCR6O00574 342 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 HOXA3O43365 443 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 ZNF682O95780 498 aa9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 ECDO95905 644 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-206ENST00000535668 LHBP01229 141 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms