RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 RSRP1Q9BUV0 290 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 CDCA4Q9BXL8 241 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 TSPYL1Q9H0U9 437 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM27Q9HBJ8 222 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 BCL2L10Q9HD36 194 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 NANSQ9NR45 359 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 PTTG3PQ9NZH4 202 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 PSMC3IPQ9P2W1 217 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4Q9UBX2 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 NDRG4Q9ULP0 352 aaKnown RBP6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DNAH7Q8WXX0 4024 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 A0A1B0GWJ7 208 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 CENPBD1B2RD01 187 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 MCIDASD6RGH6 385 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 H0YHG0 523 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 BLOC1S5-TXNDC5H3BN57 136 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 PEX14O75381 377 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 IFNW1P05000 195 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 SCG5P05408 212 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 ASAH2BP0C7U1 165 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 FPR3P25089 353 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 IL12AP29459 219 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 PRKAR1BP31321 381 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 SERPINB5P36952 375 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 UBE2E1P51965 193 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 CLNS1AP54105 237 aaKnown RBP6.69□□□□□ -1.34
CLIP1-206ENST00000535290 UGT2B15P54855 530 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 PCBD1P61457 104 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 UFM1P61960 85 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 ACSM1Q08AH1 577 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 DPY19L1Q2PZI1 675 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 GTDC1Q4AE62 458 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 ARMC4Q5T2S8 1044 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 FBXW12Q6X9E4 464 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 LINC00114Q6XXX2 140 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 FAM90A1Q86YD7 464 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 CMTM4Q8IZR5 234 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 OR5AU1Q8NGC0 362 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 IFT81Q8WYA0 676 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 ERGIC1Q969X5 290 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 VPS33AQ96AX1 596 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 RCHY1Q96PM5 261 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 OR52E6Q96RD3 313 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 ECSITQ9BQ95 431 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 NUF2Q9BZD4 464 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 MEGF9Q9H1U4 602 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 MUC13Q9H3R2 512 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 SMURF2Q9HAU4 748 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 BRD7Q9NPI1 651 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM100Q9NV29 134 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 RNF7Q9UBF6 113 aa6.69□□□□□ -1.34
CLIP1-206ENST00000535290 IGHV3OR15-7A0A075B7D8 119 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 TRAV38-1A0A0B4J264 116 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 A0A1W2PRG6 482 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 TCRBV4S1A1TA0A5B7 111 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 OOEPA6NGQ2 149 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 IQCF6A8MYZ5 107 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 KPNA4O00629 521 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-206ENST00000535290 COPEO14579 308 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 NDUFA2O43678 99 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 DOK2O60496 412 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 FMO6PO60774 539 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 LHBP01229 141 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 HIST1H2ABP04908 130 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 COX5BP10606 129 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 RGS6P49758 472 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 RGS8P57771 180 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-206ENST00000535290 NCALDP61601 193 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 DGCR2P98153 550 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 RPL18Q07020 188 aaKnown RBP6.68□□□□□ -1.34
CLIP1-206ENST00000535290 CD47Q08722 323 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 AANATQ16613 207 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 HCP5Q6MZN7 132 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 C8orf74Q6P047 294 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 DHRS4L2Q6PKH6 230 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 HIST3H2AQ7L7L0 130 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 SLC30A8Q8IWU4 369 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 MRPL41Q8IXM3 137 aaKnown RBP6.68□□□□□ -1.34
CLIP1-206ENST00000535290 CELF2-AS1Q8N7Q2 184 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 HIST1H2ACQ93077 130 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 COG8Q96MW5 612 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 PRR25Q96S07 402 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 GPR61Q9BZJ8 451 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 WDR76Q9H967 626 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 TPT1P8Q9HAU6 139 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 SLCO1B3Q9NPD5 702 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF229Q9UJW7 825 aa6.68□□□□□ -1.34
CLIP1-206ENST00000535290 TRBV23-1A0A0A0MS06 115 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM247A6NEH6 219 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 RFXANKO14593 260 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 RIPK2O43353 540 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 SYNGR1O43759 233 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 LYPD3O95274 346 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 THY1P04216 161 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 SERPINE1P05121 402 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 DBHP09172 617 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 UMPSP11172 480 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 ETS2P15036 469 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 KRT4P19013 534 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms