RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CELF2-AS1Q8N7Q2 184 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 OR2V1Q8NHB1 315 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 ROBO4Q8WZ75 1007 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 UBE2FQ969M7 185 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 SOX7Q9BT81 388 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 SEC14L6B5MCN3 397 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 RPS19P39019 145 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 TCTN3Q6NUS6 607 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 FAM58AQ8N1B3 248 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 FGF14Q92915 247 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 KCNG2Q9UJ96 466 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 TEX51A0A1B0GUA7 166 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 XRCC3O43542 346 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 H2AFB1P0C5Y9 115 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 ZNF26P17031 533 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 FZD2Q14332 565 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 NUDT8Q8WV74 236 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 PRKNO60260 465 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 TFAP2AP05549 437 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 CBR1P16152 277 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 TMUB2Q71RG4 321 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 BCL7CQ8WUZ0 217 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 PBOV1Q9GZY1 135 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 TBX21Q9UL17 535 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 CHST2Q9Y4C5 530 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 METTL12A8MUP2 240 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 KLK10O43240 276 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 FCMRO60667 390 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 B4GALT1P15291 398 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 HOXD12P35452 270 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 R4GMQ9 66 aa16.49■□□□□ 0.23
SFSWAP-203ENST00000535236 SMLR1H3BR10 107 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 ZDHHC11BP0C7U3 371 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 HAAOP46952 286 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 OR11G2Q8NGC1 345 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 SLC7A6Q92536 515 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 SLC25A46Q96AG3 418 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 SIAEQ9HAT2 523 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 IGLV3-27P01718 113 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 CEACAM5P06731 702 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 EMDP50402 254 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 BPIFB3P59826 476 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 FAM26EQ8N5C1 309 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 OR10P1Q8NGE3 313 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 OR52N5Q8NH56 324 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 OLIG1Q8TAK6 271 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 A3GALT2U3KPV4 340 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 GPR37O15354 613 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 ARRB2P32121 409 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 BSGP35613 385 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 P2RX3P56373 397 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 AGBL4Q5VU57 503 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 CD276Q5ZPR3 534 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 KCNRGQ8N5I3 272 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 GLI4P10075 376 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 ACSM5Q6NUN0 579 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 OR52I2Q8NH67 350 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 APH1BQ8WW43 257 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 TMEM230Q96A57 120 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 SPACA5Q96QH8 159 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 HDGFL3Q9Y3E1 203 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 TIAM2Q8IVF5 1701 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 FAM221AA4D161 298 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 TERTO14746 1132 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 ALKBH6Q3KRA9 238 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 LILRB4Q8NHJ6 448 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 MARC2Q969Z3 335 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 AK3Q9UIJ7 227 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 POMT2Q9UKY4 750 aa16.48■□□□□ 0.23
SFSWAP-203ENST00000535236 CHEK1O14757 476 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 B4GALT3O60512 393 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 OR2A2Q6IF42 318 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 CMTM4Q8IZR5 234 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 UPK1AO00322 258 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 C17orf107Q6ZR85 190 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 MZB1Q8WU39 189 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 FYTTD1Q96QD9 318 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 PLA2G12AQ9BZM1 189 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 CSAG2Q9Y5P2 127 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 SERTM2A0A1B0GWG4 89 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 DHHO43323 396 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 CXCL10P02778 98 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 MYF5P13349 255 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 OPRM1P35372 400 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 OR10A3P58181 314 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 SMIM21Q3B7S5 101 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 ELFN2Q5R3F8 820 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 OR5B3Q8NH48 314 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 TTC9Q92623 222 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 GPR78Q96P69 363 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 ZNF724A8MTY0 619 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 FOXF1Q12946 379 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 AVPI1Q5T686 147 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 ARSGQ96EG1 525 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 TAAR6Q96RI8 345 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 TEX101Q9BY14 249 aa16.47■□□□□ 0.23
SFSWAP-203ENST00000535236 NDUFB11Q9NX14 153 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms