RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TSPAN13O95857 204 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 NRASP01111 189 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 HRASP01112 189 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 KRASP01116 189 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 GPX1P07203 203 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ETS1P14921 441 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 HOXB8P17481 243 aaPredicted RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 PRKACBP22694 351 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 MAPK3P27361 379 aaPredicted RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 HTR2AP28223 471 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 RBM34P42696 430 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 MAGEA8P43361 318 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 YAP1P46937 504 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ACADVLP49748 655 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 FBXW4P57775 412 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CTAG1AP78358 180 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CYP24A1Q07973 514 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ACTN3Q08043 901 aaPredicted RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CBX3Q13185 183 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 PNOCQ13519 176 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 LASP1Q14847 261 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CST6Q15828 149 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 TATDN3Q17R31 274 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 C16orf87Q6PH81 154 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CCDC80Q76M96 950 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 MDP1Q86V88 176 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CDH26Q8IXH8 852 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CPNE9Q8IYJ1 553 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ELMOD2Q8IZ81 293 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 TRMT10AQ8TBZ6 339 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 MAGEE2Q8TD90 523 aaPredicted RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 LRRC29Q8WV35 223 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 UBE2Q2Q8WVN8 375 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 SLC13A3Q8WWT9 602 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 KRT35Q92764 455 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 STMN2Q93045 179 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 RBPMSQ93062 196 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 DCPSQ96C86 337 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 CCDC43Q96MW1 224 aaKnown RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 SMR3AQ99954 134 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 NUDT9Q9BW91 350 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 SAMD10Q9BYL1 202 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ELOVL3Q9HB03 270 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 TMEM27Q9HBJ8 222 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 ZNF160Q9HCG1 818 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 PDP1Q9P0J1 537 aaPredicted RBP-0.24□□□□□ -2.45
COPB1-212ENST00000534771 SPASTQ9UBP0 616 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 POLDIP2Q9Y2S7 368 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 MEMO1Q9Y316 297 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 TIMM10BQ9Y5J6 103 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 MYO9BQ13459 2157 aa-0.24□□□□□ -2.45
COPB1-212ENST00000534771 VWA8A3KMH1 1905 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 ROS1P08922 2347 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 NAV2Q8IVL1 2488 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TRGV2A0A075B6R0 118 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 IGKV1OR2-108A0A075B7D4 117 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 ISPDA4D126 451 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TRIM64A6NGJ6 449 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TRIM64BA6NI03 449 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 CENPBD1B2RD01 187 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TAAR5O14804 337 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 CDC40O60508 579 aaKnown RBP eCLIP-0.25□□□□□ -2.45
COPB1-212ENST00000534771 FCMRO60667 390 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 SLC19A2O60779 497 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 RAMP3O60896 148 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 KERAO60938 352 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 RDH16O75452 317 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 CRTAPO75718 401 aaPredicted RBP-0.25□□□□□ -2.45
COPB1-212ENST00000534771 PRH1P02810 166 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 MT-ND4P03905 459 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 MAS1P04201 325 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 CRYGBP07316 175 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 DNAJB1P25685 340 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TALDO1P37837 337 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 OR12D2P58182 307 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 FA2HQ7L5A8 372 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 DHDDSQ86SQ9 333 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 COMTD1Q86VU5 262 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 ORMDL3Q8N138 153 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 KDM8Q8N371 416 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 OR8K3Q8NH51 312 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 OR1L1Q8NH94 360 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TBRG4Q969Z0 631 aaKnown RBP eCLIP-0.25□□□□□ -2.45
COPB1-212ENST00000534771 DNAJC30Q96LL9 226 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 SAMD8Q96LT4 415 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 TRIB3Q96RU7 358 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 LRRN3Q9H3W5 708 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 NIPAL2Q9H841 368 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 OR2S2Q9NQN1 319 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 DDX18Q9NVP1 670 aaKnown RBP-0.25□□□□□ -2.45
COPB1-212ENST00000534771 RNF14Q9UBS8 474 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 FARSAQ9Y285 508 aaKnown RBP-0.25□□□□□ -2.45
COPB1-212ENST00000534771 LRRC42Q9Y546 428 aa-0.25□□□□□ -2.45
COPB1-212ENST00000534771 SOX21Q9Y651 276 aaPredicted RBP-0.25□□□□□ -2.45
COPB1-212ENST00000534771 DOCK6Q96HP0 2047 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 FRAS1Q86XX4 4008 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.26□□□□□ -2.45
COPB1-212ENST00000534771 ZNF816-ZNF321PA0A0X1KG74 233 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 IZUMO1RA6ND01 250 aa-0.26□□□□□ -2.45
COPB1-212ENST00000534771 TIMM44O43615 452 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms