RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MICU2Q8IYU8 434 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RDH10Q8IZV5 341 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SLC22A18ASQ8N1D0 253 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CLEC4FQ8N1N0 589 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ABHD12Q8N2K0 398 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 GPR137CQ8N3F9 429 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 PRSS35Q8N3Z0 413 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 COMMD1Q8N668 190 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TEX26Q8N6G2 289 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TMEM99Q8N816 258 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ZNF781Q8N8C0 355 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 FBXO36Q8NEA4 188 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 DEFB124Q8NES8 71 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OR9K2Q8NGE7 335 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OR8J1Q8NGP2 316 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MAGEE2Q8TD90 523 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 UBTD2Q8WUN7 234 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 PHYHIPQ92561 330 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 KLK6Q92876 244 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 HIST1H2ACQ93077 130 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RAB39BQ96DA2 213 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 LRRC39Q96DD0 335 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 NXPE2Q96DL1 559 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ZHX1-C8orf76Q96EF9 292 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ELMO2Q96JJ3 720 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SERAC1Q96JX3 654 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 C4orf36Q96KX1 117 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 FOPNLQ96NB1 174 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RDH12Q96NR8 316 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RNF157Q96PX1 679 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SMIM14Q96QK8 99 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OR52B2Q96RD2 323 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OMDQ99983 421 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ZNF670Q9BS34 389 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 NTMT1Q9BV86 223 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 NUSAP1Q9BXS6 441 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 SPNS1Q9H2V7 528 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MEAF6Q9HAF1 191 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MRPL40Q9NQ50 206 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 FAM120CQ9NX05 1096 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 MAT2BQ9NZL9 334 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RCOR3Q9P2K3 495 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 OPTCQ9UBM4 332 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SEC14L3Q9UDX4 400 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TBC1D24Q9ULP9 559 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 COPS3Q9UNS2 423 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 NCKAP1Q9Y2A7 1128 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 U3KQA8 63 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CACNA1GO43497 2377 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 FAM208BQ5VWN6 2430 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SMG1Q96Q15 3661 aaKnown RBP2.75□□□□□ -1.97
USP48-215ENST00000534705 SPENQ96T58 3664 aaKnown RBP2.75□□□□□ -1.97
USP48-215ENST00000534705 CPAMD8Q8IZJ3 1885 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 COL6A6A6NMZ7 2263 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 IGLV4-3A0A075B6K6 122 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 IGHV3-38A0A0C4DH36 116 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 SPAARA0A1B0GVQ0 90 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 LOC390937A0A1W2PQ73 354 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 IGLON5A6NGN9 336 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 CLDN24A6NM45 220 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 PDZK1P1A8MUH7 402 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 A8MXK9 166 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 PPIAL4DF5H284 164 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 PRAMEF26H0Y7S4 382 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 DFFAO00273 331 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 KPNA3O00505 521 aaPredicted RBP2.75□□□□□ -1.97
USP48-215ENST00000534705 SLC31A1O15431 190 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 ZNF264O43296 627 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 GMDSO60547 372 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 SCO1O75880 301 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 IGSF6O95976 241 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 SOD1P00441 154 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 IFNGP01579 166 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 EPOP01588 193 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 IFNA4P05014 189 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 SERPINE1P05121 402 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 HLA-DQB2P05538 268 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 KRT7P08729 469 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 RBP1P09455 135 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 ADORA3P0DMS8 318 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 CT45A8P0DMV1 189 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 CT45A9P0DMV2 189 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 PNMTP11086 282 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 POU2F1P14859 743 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 C4BPBP20851 252 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 PTBP1P26599 531 aaKnown RBP eCLIP2.75□□□□□ -1.97
USP48-215ENST00000534705 CALCRP30988 508 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 MAT2AP31153 395 aaKnown RBP2.75□□□□□ -1.97
USP48-215ENST00000534705 DLSTP36957 453 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 TGFBR2P37173 567 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 CDKN2BP42772 138 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 MAGEA12P43365 314 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 SERPINB10P48595 397 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 POU3F4P49335 361 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 GDI2P50395 445 aaKnown RBP2.75□□□□□ -1.97
USP48-215ENST00000534705 NOVA1P51513 510 aaKnown RBP2.75□□□□□ -1.97
USP48-215ENST00000534705 OR2B6P58173 313 aa2.75□□□□□ -1.97
USP48-215ENST00000534705 PFN3P60673 137 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms