RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 NUP50Q9UKX7 468 aa6.74□□□□□ -1.33
LINC00958-207ENST00000534477 SOX21Q9Y651 276 aaPredicted RBP6.74□□□□□ -1.33
LINC00958-207ENST00000534477 TANC2Q9HCD6 1990 aa6.74□□□□□ -1.33
LINC00958-207ENST00000534477 TRAV40A0A0B4J280 105 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 MDFIC2A0A1B0GVS7 189 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 A6NIZ1 184 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 CENPBD1B2RD01 187 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ANKRD65E5RJM6 399 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 TRAPPC2LH3BP13 241 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 SGCEO43556 437 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 CIB2O75838 187 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 CYB5R3P00387 301 aaPredicted RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 IGHV2-70P01814 119 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 IGHMP01871 453 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 RPS2P15880 293 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 FAHP16930 419 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 TNFRSF1AP19438 455 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 CALB2P22676 271 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 LIPAP38571 399 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ERFP50548 548 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 GZMMP51124 257 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 RAP1BP61224 184 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 BTG1P62324 171 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 RAP1AP62834 184 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 SCRN3Q0VDG4 424 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ENDOGQ14249 297 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 HLXQ14774 488 aaPredicted RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ZMYND11Q15326 602 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 SNCBQ16143 134 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 DNAL1Q4LDG9 190 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ERICH5Q6P6B1 374 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 CCDC80Q76M96 950 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 RRM2BQ7LG56 351 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 BHLHE23Q8NDY6 225 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ZNF420Q8TAQ5 688 aaPredicted RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 POP5Q969H6 163 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 NMD3Q96D46 503 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 PRRC1Q96M27 445 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 Q96M85 177 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ZNF570Q96NI8 536 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 OR2V2Q96R30 315 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 SEPHS2Q99611 448 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 MYLK2Q9H1R3 596 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 WDR76Q9H967 626 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 UNKLQ9H9P5 680 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 PATZ1Q9HBE1 687 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 IL20RAQ9UHF4 553 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 NDRG4Q9ULP0 352 aaKnown RBP6.73□□□□□ -1.33
LINC00958-207ENST00000534477 PPP1R3CQ9UQK1 317 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 ADAM18Q9Y3Q7 739 aa6.73□□□□□ -1.33
LINC00958-207ENST00000534477 CEACAM18A8MTB9 384 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 FAM220BPB1ANY3 271 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 SOCS2O14508 198 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 SURF4O15260 269 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 IFNW1P05000 195 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 IGHV4-38-2P0DP08 117 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 HKR1P10072 659 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 SELEP16581 610 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 PRTN3P24158 256 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 MDH2P40926 338 aaKnown RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 ZNF133P52736 654 aaPredicted RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 GNB2P62879 340 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 TRAM2Q15035 370 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 FAM201AQ5SY85 155 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 OR2T2Q6IF00 324 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 CGB2Q6NT52 195 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 LEG1Q6P5S2 330 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 TBPL2Q6SJ96 375 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 BTNL3Q6UXE8 466 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 Q6ZR03 302 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 VTCN1Q7Z7D3 282 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 PARP8Q8N3A8 854 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 BOLLQ8N9W6 283 aaKnown RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 NPEPL1Q8NDH3 523 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 OR2T12Q8NG77 320 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 OR8J3Q8NGG0 315 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 OR52E2Q8NGJ4 325 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 DVL3Q92997 716 aaPredicted RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 STMN2Q93045 179 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 SLC25A28Q96A46 364 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 RASD2Q96D21 266 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 ZNF48Q96MX3 618 aaPredicted RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 GPA33Q99795 319 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 ZNF747Q9BV97 191 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 POLR2J2Q9GZM3 115 aaKnown RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 POLR2J3Q9H1A7 115 aaKnown RBP6.72□□□□□ -1.33
LINC00958-207ENST00000534477 MAN2C1Q9NTJ4 1040 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 A4GNTQ9UNA3 340 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 STARD10Q9Y365 291 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 INSIG2Q9Y5U4 225 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 SNX13Q9Y5W8 968 aa6.72□□□□□ -1.33
LINC00958-207ENST00000534477 TEX13CA0A0J9YWL9 993 aa6.71□□□□□ -1.34
LINC00958-207ENST00000534477 ELOVL7A1L3X0 281 aa6.71□□□□□ -1.34
LINC00958-207ENST00000534477 H0YL77 283 aa6.71□□□□□ -1.34
LINC00958-207ENST00000534477 H3BSA7 217 aa6.71□□□□□ -1.34
LINC00958-207ENST00000534477 FXYD1O00168 92 aa6.71□□□□□ -1.34
LINC00958-207ENST00000534477 IMPA2O14732 288 aa6.71□□□□□ -1.34
LINC00958-207ENST00000534477 GYG2O15488 501 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms