RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 UMODL1-AS1Q8N2C9 162 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 CATSPER1Q8NEC5 780 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 CCDC112Q8NEF3 446 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 NEIL3Q8TAT5 605 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 PIH1D2Q8WWB5 315 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 CTNNBL1Q8WYA6 563 aaPredicted RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 RPUSD4Q96CM3 377 aaKnown RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 ZNF641Q96N77 438 aaPredicted RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 POLR2J2Q9GZM3 115 aaKnown RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 POLR2J3Q9H1A7 115 aaKnown RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 NUDT15Q9NV35 164 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 ETNK2Q9NVF9 386 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 PHF11Q9UIL8 331 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 STAP1Q9ULZ2 295 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 AP1M2Q9Y6Q5 423 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 FBN3Q75N90 2809 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 A8MUA0 341 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 DFFAO00273 331 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 HCRTR1O43613 425 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 TRAF3IP2O43734 574 aaPredicted RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 NPIPB7O75200 414 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 P2RY1P47900 373 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 DAP3P51398 398 aaKnown RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 UBE2IP63279 158 aaKnown RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 KLHL30Q0D2K2 578 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 ARL6IP1Q15041 203 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 TPD52L1Q16890 204 aaPredicted RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 LRRC66Q68CR7 880 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 CES3Q6UWW8 571 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 NCCRP1Q6ZVX7 275 aaPredicted RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 TMEM35BQ8NCS4 154 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 NRGNQ92686 78 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 MYDGFQ969H8 173 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 PELI1Q96FA3 418 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 SH3YL1Q96HL8 342 aaPredicted RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 COX14Q96I36 57 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 C7orf34Q96L11 122 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 GSDMAQ96QA5 445 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 MYCBPQ99417 103 aaPredicted RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 ALG12Q9BV10 488 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 RIBC2Q9H4K1 309 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 AIG1Q9NVV5 245 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 TREM2Q9NZC2 230 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 IL36GQ9NZH8 169 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 PCSK1NQ9UHG2 260 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 KIF25Q9UIL4 384 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 SH3BGRL2Q9UJC5 107 aa4.16□□□□□ -1.74
CASP4-213ENST00000534356 FARSAQ9Y285 508 aaKnown RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 MN1Q10571 1320 aaPredicted RBP4.16□□□□□ -1.74
CASP4-213ENST00000534356 ABCA4P78363 2273 aa4.15□□□□□ -1.74
CASP4-213ENST00000534356 INTS1Q8N201 2190 aaKnown RBP4.15□□□□□ -1.75
CASP4-213ENST00000534356 A0A1B0GUS0 222 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 HELTA6NFD8 242 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 TAPBPO15533 448 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 OR10H3O60404 316 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 TPST2O60704 377 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 TBX19O60806 448 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 LGI1O95970 557 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 PIRTP0C851 137 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 SDC4P31431 198 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 OTX2P32243 289 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 SOX6P35712 828 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 CHI3L1P36222 383 aaPredicted RBP4.15□□□□□ -1.75
CASP4-213ENST00000534356 CSNK1DP48730 415 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 CHRNA6Q15825 494 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 PDK4Q16654 411 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 EXOC3L4Q17RC7 722 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 NSUN5P1Q3KNT7 163 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 ZNF658BQ4V348 819 aaPredicted RBP4.15□□□□□ -1.75
CASP4-213ENST00000534356 KLF17Q5JT82 389 aaPredicted RBP4.15□□□□□ -1.75
CASP4-213ENST00000534356 GPRC6AQ5T6X5 926 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 C1orf146Q5VVC0 180 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 ZNF547Q8IVP9 402 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 CLEC4FQ8N1N0 589 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 SUMF2Q8NBJ7 301 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 NIPSNAP3BQ9BS92 247 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 RAB33BQ9H082 229 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 OR2AG1Q9H205 316 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 JMJD1CQ15652 2540 aa4.15□□□□□ -1.75
CASP4-213ENST00000534356 NCOA6Q14686 2063 aaPredicted RBP4.14□□□□□ -1.75
CASP4-213ENST00000534356 IGKV1D-8A0A087WSZ0 117 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 LRP5LA4QPB2 252 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 GFYI3L273 518 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 CXCL13O43927 109 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 DPM1O60762 260 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 NOL3O60936 208 aaKnown RBP4.14□□□□□ -1.75
CASP4-213ENST00000534356 PRG2P13727 222 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 NELFEP18615 380 aaKnown RBP4.14□□□□□ -1.75
CASP4-213ENST00000534356 COX7A1P24310 79 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 MMP11P24347 488 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 STC1P52823 247 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 TPI1P60174 286 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 NSDHLQ15738 373 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 PARP15Q460N3 678 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 PAGE3Q5JUK9 113 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 STRADAQ7RTN6 431 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 ZNF540Q8NDQ6 660 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 IPMKQ8NFU5 416 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 OR1F12Q8NHA8 337 aa4.14□□□□□ -1.75
CASP4-213ENST00000534356 ITLN2Q8WWU7 325 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms