RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 IGHV2-70P01814 119 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 SELEP16581 610 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 EPHA1P21709 976 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 BTG1P62324 171 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 DBPQ10586 325 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-211ENST00000533492 HNRNPA0Q13151 305 aaKnown RBP13.03□□□□□ -0.32
CPSF1-211ENST00000533492 SLC18B1Q6NT16 456 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 C1orf229Q6ZS94 237 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-211ENST00000533492 ARHGAP24Q8N264 748 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 OR9Q2Q8NGE9 314 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 CCT8L2Q96SF2 557 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 ATF6BQ99941 703 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 TRIM15Q9C019 465 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 CYB5R1Q9UHQ9 305 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
CPSF1-211ENST00000533492 IFNL4K9M1U5 179 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 HAX1O00165 279 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 RGS9O75916 674 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-211ENST00000533492 VENTXO95231 258 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 LCATP04180 440 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 ATP6V1B2P21281 511 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 SRP9P49458 86 aaKnown RBP13.02□□□□□ -0.33
CPSF1-211ENST00000533492 MALLQ13021 153 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 TMEM155Q4W5P6 130 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 CFAP77Q6ZQR2 320 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 C1QL2Q7Z5L3 287 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 LRRC28Q86X40 367 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-211ENST00000533492 DHFR2Q86XF0 187 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 FITM2Q8N6M3 262 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 BHLHE23Q8NDY6 225 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 OR10AD1Q8NGE0 317 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 C1QTNF5Q9BXJ0 243 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 MUC13Q9H3R2 512 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 WDR76Q9H967 626 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 PATZ1Q9HBE1 687 aaKnown RBP13.02□□□□□ -0.33
CPSF1-211ENST00000533492 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 TMEM100Q9NV29 134 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 KCNG2Q9UJ96 466 aa13.02□□□□□ -0.33
CPSF1-211ENST00000533492 IQCF6A8MYZ5 107 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 TMEM178BH3BS89 294 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 GASTP01350 101 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 ACSM4P0C7M7 580 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 ADRA2CP18825 462 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 PYCR1P32322 319 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 GGT2P36268 569 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 RBMXP38159 391 aaKnown RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 MDH2P40926 338 aaKnown RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 TPTEP56180 551 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 PPP1R8Q12972 351 aaKnown RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 RSPO1Q2MKA7 263 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 FAM98BQ52LJ0 330 aaKnown RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 RASSF6Q6ZTQ3 369 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 MUC20Q8N307 709 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 MEGF10Q96KG7 1140 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 MAGIXQ9H6Y5 334 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 TBC1D23Q9NUY8 699 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 MRPL22Q9NWU5 206 aaKnown RBP13.01□□□□□ -0.33
CPSF1-211ENST00000533492 IL20Q9NYY1 176 aa13.01□□□□□ -0.33
CPSF1-211ENST00000533492 PPIAL4EA0A075B759 164 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 TVP23AA6NH52 213 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 LRRC30A6NM36 301 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 PPIAL4DF5H284 164 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 H0YL77 283 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 BHLHE40O14503 412 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 PPIAL4FP0DN26 164 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 ZFP36P26651 326 aaKnown RBP13□□□□□ -0.33
CPSF1-211ENST00000533492 MAGEA2P43356 314 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 MMP16P51512 607 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 TRIM25Q14258 630 aaKnown RBP13□□□□□ -0.33
CPSF1-211ENST00000533492 ZMYND11Q15326 602 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 PGAP1Q75T13 922 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 NAA40Q86UY6 237 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 BPIFB2Q8N4F0 458 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13□□□□□ -0.33
CPSF1-211ENST00000533492 AQP11Q8NBQ7 271 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 OR4C15Q8NGM1 316 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 ZNF420Q8TAQ5 688 aaPredicted RBP13□□□□□ -0.33
CPSF1-211ENST00000533492 ZFAND2BQ8WV99 257 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 POP5Q969H6 163 aaKnown RBP13□□□□□ -0.33
CPSF1-211ENST00000533492 SPTSSAQ969W0 71 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 SLCO4A1Q96BD0 722 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 SIGLEC11Q96RL6 698 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 JMJD8Q96S16 334 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 SUCNR1Q9BXA5 334 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 TSSK6Q9BXA6 273 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 REEP1Q9H902 201 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 SAMHD1Q9Y3Z3 626 aaKnown RBP13□□□□□ -0.33
CPSF1-211ENST00000533492 U3KQV3 271 aa13□□□□□ -0.33
CPSF1-211ENST00000533492 IGHV3-64DA0A0J9YX35 117 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 TCRBV5S2A0A599 114 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 F5H5P2 479 aa12.99□□□□□ -0.33
CPSF1-211ENST00000533492 TRIM77I1YAP6 450 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms