RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 TRPC5OSA6NMA1 111 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 M0QX08 132 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 LGALS8O00214 317 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 ADAM20O43506 726 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 NDUFA2O43678 99 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 OR10H3O60404 316 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 FAM20BO75063 409 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 PPP1R3DO95685 299 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 ECDO95905 644 aaPredicted RBP6.39□□□□□ -1.39
NXF1-215ENST00000533440 HLA-DPB1P04440 258 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 CD200P41217 278 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 RGS6P49758 472 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 RPL27P61353 136 aaKnown RBP6.39□□□□□ -1.39
NXF1-215ENST00000533440 HOXA4Q00056 320 aaPredicted RBP6.39□□□□□ -1.39
NXF1-215ENST00000533440 EMX1Q04741 257 aaPredicted RBP6.39□□□□□ -1.39
NXF1-215ENST00000533440 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 C1orf94Q6P1W5 598 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 CALHM3Q86XJ0 350 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 NKAIN4Q8IVV8 208 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 OR5L1Q8NGL2 311 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 OR11L1Q8NGX0 322 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 SGTBQ96EQ0 304 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 DMRTB1Q96MA1 342 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 ECSITQ9BQ95 431 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 MMADHCQ9H3L0 296 aaPredicted RBP6.39□□□□□ -1.39
NXF1-215ENST00000533440 RANBP3Q9H6Z4 567 aaPredicted RBP6.39□□□□□ -1.39
NXF1-215ENST00000533440 CNTD2Q9H8S5 307 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 EMC7Q9NPA0 242 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 C20orf141Q9NUB4 165 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 TMEM100Q9NV29 134 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 PTTG3PQ9NZH4 202 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 VAPAQ9P0L0 249 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 ATPIF1Q9UII2 106 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 ANGPT4Q9Y264 503 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 HIF3AQ9Y2N7 669 aa6.39□□□□□ -1.39
NXF1-215ENST00000533440 ELOVL7A1L3X0 281 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 NPFFO15130 113 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 UBDO15205 165 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 SHOX2O60902 331 aaPredicted RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 PTBP3O95758 552 aaKnown RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 OPN1SWP03999 348 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 DBHP09172 617 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 CD247P20963 164 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 FPR3P25089 353 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 RBM34P42696 430 aaKnown RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 MRPL19P49406 292 aaKnown RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 TOP3AQ13472 1001 aaPredicted RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 AQP6Q13520 282 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 MPPED2Q15777 294 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 NSUN5P1Q3KNT7 163 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 CCDC92Q53HC0 331 aaPredicted RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 ALG10Q5BKT4 473 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 PAGE3Q5JUK9 113 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 PRAMEF6Q5VXH4 476 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 SFRP4Q6FHJ7 346 aaPredicted RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 CRIP3Q6Q6R5 217 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 FUNDC1Q8IVP5 155 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 LYG1Q8N1E2 194 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 LRRC75AQ8NAA5 344 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 LY6G5BQ8NDX9 201 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 BHLHE23Q8NDY6 225 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 OR4F17Q8NGA8 305 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 OR1F12Q8NHA8 337 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 OR2T6Q8NHC8 308 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 TMEM255BQ8WV15 326 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.38□□□□□ -1.39
NXF1-215ENST00000533440 ANP32BQ92688 251 aaKnown RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 APOBEC3DQ96AK3 386 aaPredicted RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 R3HDM4Q96D70 268 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 OR4F4Q96R69 305 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 OR52B2Q96RD2 323 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 OCSTAMPQ9BR26 566 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 SSU72Q9NP77 194 aaKnown RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 TRIM36Q9NQ86 728 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 UFSP2Q9NUQ7 469 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 RNF7Q9UBF6 113 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 KAAG1Q9UBP8 84 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 RPUSD1Q9UJJ7 312 aaKnown RBP6.38□□□□□ -1.39
NXF1-215ENST00000533440 CORO2BQ9UQ03 480 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 MAB21L2Q9Y586 359 aa6.38□□□□□ -1.39
NXF1-215ENST00000533440 TRAV38-1A0A0B4J264 116 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 WI2-2373I1.2A0A1W2PRP0 233 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 MEGF11A6BM72 1044 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 OOEPA6NGQ2 149 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 A6NIZ1 184 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 FBP2O00757 339 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 DVL1O14640 695 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 SNNO75324 88 aaPredicted RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 VIMP08670 466 aaKnown RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 IGLL1P15814 213 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 EEF1B2P24534 225 aaKnown RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 CTXN1P60606 82 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 RAP1BP61224 184 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 RAP1AP62834 184 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 IFFO1Q0D2I5 559 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 MPP2Q14168 576 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 DEFB121Q5J5C9 76 aa6.37□□□□□ -1.39
NXF1-215ENST00000533440 INTS11Q5TA45 600 aaKnown RBP6.37□□□□□ -1.39
NXF1-215ENST00000533440 COLCA1Q6ZS62 124 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms