RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SLC7A6Q92536 515 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 MRPL24Q96A35 216 aaKnown RBP12.44□□□□□ -0.42
CPSF1-206ENST00000531480 SLAMF6Q96DU3 332 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 MARS2Q96GW9 593 aaKnown RBP12.44□□□□□ -0.42
CPSF1-206ENST00000531480 AMELYQ99218 206 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 MNTQ99583 582 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 C1QTNF5Q9BXJ0 243 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 ELOVL3Q9HB03 270 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 BEX4Q9NWD9 120 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-206ENST00000531480 PLEKHA6Q9Y2H5 1048 aa12.44□□□□□ -0.42
CPSF1-206ENST00000531480 AKAP9Q99996 3911 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 B9A039 149 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 ENTPD6O75354 484 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 LYNP07948 512 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 RPSAP08865 295 aaKnown RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 SBK2P0C263 348 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 OR4A8P0C604 315 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 CCDC159P0C7I6 412 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 DNASE1P24855 282 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 NAA10P41227 235 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 ISL1P61371 349 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 ROM1Q03395 351 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 EIF2B1Q14232 305 aaKnown RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 ZNF786Q8N393 782 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 APH1BQ8WW43 257 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 DOK1Q99704 481 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 CCL19Q99731 98 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 CXXC4Q9H2H0 198 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 DNAJC27Q9NZQ0 273 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 EIF3KQ9UBQ5 218 aaKnown RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 FBXO9Q9UK97 447 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 LAMP3Q9UQV4 416 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 KLHDC2Q9Y2U9 406 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 CMAHPQ9Y471 501 aa12.43□□□□□ -0.42
CPSF1-206ENST00000531480 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
CPSF1-206ENST00000531480 ARID1AO14497 2285 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 VSTM5A8MXK1 200 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 H7C417 338 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 J3QRE1 110 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 WBP4O75554 376 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 ABHD16AO95870 558 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 FAM157BP0CG42 384 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 CCNOP22674 350 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 ERVS71-1P61550 626 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 GRB2P62993 217 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 KCTD21Q4G0X4 260 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 RGS7BPQ6MZT1 257 aaPredicted RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 TMEM154Q6P9G4 183 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 DEGS2Q6QHC5 323 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 DRAM2Q6UX65 266 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 PRSS45Q7RTY3 260 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 MYDGFQ969H8 173 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 COG8Q96MW5 612 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 MRPL37Q9BZE1 423 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 GSX2Q9BZM3 304 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 MRPS18AQ9NVS2 196 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 COPS3Q9UNS2 423 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 RPL36Q9Y3U8 105 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 SNX5Q9Y5X3 404 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 TMEM14AQ9Y6G1 99 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 TEP1Q99973 2627 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 USF3Q68DE3 2245 aa12.42□□□□□ -0.42
CPSF1-206ENST00000531480 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 MAP1AP78559 2803 aaPredicted RBP12.42□□□□□ -0.42
CPSF1-206ENST00000531480 A0A087WXM4 84 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 PRR32B1ATL7 298 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 M0R135 149 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 IGHV3-13P01766 116 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
CPSF1-206ENST00000531480 DCTDP32321 178 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 SLC15A1P46059 708 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 MTNR1AP48039 350 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 TPTEP56180 551 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 GABARAPL2P60520 117 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 PPP1CBP62140 327 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
CPSF1-206ENST00000531480 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 C6orf141Q5SZD1 244 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 FBXW12Q6X9E4 464 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 OR1J1Q8NGS3 322 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 ABHD4Q8TB40 342 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 ASB17Q8WXJ9 295 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 ZNF799Q96GE5 643 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 FOXC2Q99958 501 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 BATF3Q9NR55 127 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 LAMP5Q9UJQ1 280 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 EXOGQ9Y2C4 368 aaKnown RBP12.41□□□□□ -0.42
CPSF1-206ENST00000531480 STARD10Q9Y365 291 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 GRIP1Q9Y3R0 1128 aa12.41□□□□□ -0.42
CPSF1-206ENST00000531480 F8P00451 2351 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms