RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FPR3P25089 353 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 CFPP27918 469 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 RBMXP38159 391 aaKnown RBP18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 MDH2P40926 338 aaKnown RBP18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 SLC6A9P48067 706 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 HIST1H3AP68431 136 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 ZMYND11Q15326 602 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 SLC36A3Q495N2 470 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 HIST2H3PS2Q5TEC6 136 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 HIST2H3AQ71DI3 136 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 DHFR2Q86XF0 187 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 OR4K13Q8NH42 304 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 POP5Q969H6 163 aaKnown RBP18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 C1orf21Q9H246 121 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 GCM1Q9NP62 436 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 MMP26Q9NRE1 261 aa18.76■□□□□ 0.59
TRAPPC4-210ENST00000531290 TMEM178BH3BS89 294 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 T-ENOLP0DO92 83 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 HIST1H1CP16403 213 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 SRP9P49458 86 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 COX10Q12887 443 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 CYP2R1Q6VVX0 501 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 RBMS3Q6XE24 437 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 MUC20Q8N307 709 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 OR10AD1Q8NGE0 317 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 OR2AJ1Q8NGZ0 328 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 C22orf15Q8WYQ4 148 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 LRGUKQ96M69 825 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 SIGLEC11Q96RL6 698 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 PITX2Q99697 317 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 HCAR1Q9BXC0 346 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 NTN4Q9HB63 628 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 RPRD1BQ9NQG5 326 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 AUP1Q9Y679 476 aa18.75■□□□□ 0.59
TRAPPC4-210ENST00000531290 IDH3BO43837 385 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 HLA-DQA2P01906 255 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 SEMG1P04279 462 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 SELEP16581 610 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 MMP16P51512 607 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 ECH1Q13011 328 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 ZNF154Q13106 437 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 TRIM25Q14258 630 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 ESCO2Q56NI9 601 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 C3orf56Q8N813 242 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 DEFB108BQ8NET1 73 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 SLC26A10Q8NG04 563 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 GNPDA2Q8TDQ7 276 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 MEGF10Q96KG7 1140 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 IL1RAPQ9NPH3 570 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 DDX28Q9NUL7 540 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 TMEM100Q9NV29 134 aa18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 POLR3KQ9Y2Y1 108 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC4-210ENST00000531290 TMEM89A2RUT3 159 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 F5H5K5 113 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 TRAPPC2LH3BP13 241 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 GYG2O15488 501 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 FSHBP01225 129 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 COMPP49747 757 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 ARMCX4Q5H9R4 360 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 SLC18B1Q6NT16 456 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 LINC00346Q8IVM7 164 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 ZDHHC21Q8IVQ6 265 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 BHLHE23Q8NDY6 225 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 SLC30A2Q9BRI3 323 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 MRI1Q9BV20 369 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 WDR76Q9H967 626 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 TAS2R1Q9NYW7 299 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 OR5V1Q9UGF6 321 aa18.73■□□□□ 0.59
TRAPPC4-210ENST00000531290 LRRC30A6NM36 301 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 IQCF6A8MYZ5 107 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 CPT2P23786 658 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 RRM2P31350 389 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 SEC61A1P61619 476 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 MALLQ13021 153 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 RSPO1Q2MKA7 263 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 DNAL1Q4LDG9 190 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 ZBTB46Q86UZ6 589 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 OR52E2Q8NGJ4 325 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 ZNF420Q8TAQ5 688 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 THTPAQ9BU02 230 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 C1QTNF5Q9BXJ0 243 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 TRIM15Q9C019 465 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 NUP50Q9UKX7 468 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 INSIG2Q9Y5U4 225 aa18.72■□□□□ 0.59
TRAPPC4-210ENST00000531290 OR6C68A6NDL8 312 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 CEACAM18A8MTB9 384 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 F5H0A9 414 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 H0YL77 283 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 CYB5R3P00387 301 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 LCATP04180 440 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 ZNF12P17014 697 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 GSSP48637 474 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 DBPQ10586 325 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 TSPAN31Q12999 210 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 FAM98BQ52LJ0 330 aaKnown RBP18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 SLC35F1Q5T1Q4 408 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 CFAP77Q6ZQR2 320 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 COLCA1Q6ZS62 124 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 SDR9C7Q8NEX9 313 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 DVL3Q92997 716 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms