RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NKIRAS2Q9NYR9 191 aa7.79□□□□□ -1.16
CHMP4A-205ENST00000531158 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
CHMP4A-205ENST00000531158 ERGIC3Q9Y282 383 aa7.79□□□□□ -1.16
CHMP4A-205ENST00000531158 FAM32AQ9Y421 112 aaKnown RBP7.79□□□□□ -1.16
CHMP4A-205ENST00000531158 SOX21Q9Y651 276 aaPredicted RBP7.79□□□□□ -1.16
CHMP4A-205ENST00000531158 TMEM247A6NEH6 219 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 EFCAB10A6NFE3 127 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 ZSCAN5BA6NJL1 495 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 ZAR1LA6NP61 321 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 MFN2O95140 757 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 LYPD3O95274 346 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 IGHV1-46P01743 117 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 MMP7P09237 267 aaPredicted RBP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 OR8G3PP0DMU2 310 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 EPHA2P29317 976 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 MPV17P39210 176 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 OPRL1P41146 370 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 MAP2K4P45985 399 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 CSNK1A1P48729 337 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 SEC61A1P61619 476 aaKnown RBP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 LCN2P80188 198 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 MELKQ14680 651 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 OR1Q1Q15612 314 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 RGS21Q2M5E4 152 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 ZNF554Q86TJ5 538 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 LINC00471Q8N535 108 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 CPEB3Q8NE35 698 aaKnown RBP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 OR4K5Q8NGD3 323 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 ZNF519Q8TB69 540 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 NANPQ8TBE9 248 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 SYNPRQ8TBG9 265 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 DNAJA4Q8WW22 397 aaPredicted RBP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 RAB39BQ96DA2 213 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 ZNF607Q96SK3 696 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 B3GAT2Q9NPZ5 323 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 IMPAD1Q9NX62 359 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 TAS2R5Q9NYW4 299 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 GLTPQ9NZD2 209 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 CCDC59Q9P031 241 aaKnown RBP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 RPS6KB2Q9UBS0 482 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 ZNF69Q9UC07 566 aa7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 TESQ9UGI8 421 aaKnown RBP7.78□□□□□ -1.16
CHMP4A-205ENST00000531158 C11orf98E9PRG8 122 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 TRAPPC2LH3BP13 241 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 KPNA4O00629 521 aaPredicted RBP7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 SULT1C4O75897 302 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 IGHV3-13P01766 116 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 LCKP06239 509 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 PGA4P0DJD7 388 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 PGA3P0DJD8 388 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 ADORA3P0DMS8 318 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 CD36P16671 472 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 AHCYP23526 432 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 PRTN3P24158 256 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 WNT5AP41221 380 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 UCP2P55851 309 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 FOXL1Q12952 345 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 IRF3Q14653 427 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 SMN1Q16637 294 aaKnown RBP7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 HIST3H3Q16695 136 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 TSTQ16762 297 aaKnown RBP7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 PCGF3Q3KNV8 242 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 TIMM50Q3ZCQ8 353 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 ZNF770Q6IQ21 691 aaPredicted RBP7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 DCDC5Q6ZRR9 648 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 DOK3Q7L591 496 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 ADCK1Q86TW2 530 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 IGFN1Q86VF2 1251 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 MFSD4AQ8N468 514 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 OR9Q2Q8NGE9 314 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 OR4D11Q8NGI4 311 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 OR6Q1Q8NGQ2 317 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 OR6X1Q8NH79 312 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 NIPSNAP1Q9BPW8 284 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 TMEM43Q9BTV4 400 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 SPATA5L1Q9BVQ7 753 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 CDCA4Q9BXL8 241 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 ASPNQ9BXN1 380 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 ARMC7Q9H6L4 198 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 UNKLQ9H9P5 680 aaKnown RBP7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 SAP30LQ9HAJ7 183 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 NMNAT1Q9HAN9 279 aaPredicted RBP7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 FBXL3Q9UKT7 428 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 TMCC3Q9ULS5 477 aa7.77□□□□□ -1.17
CHMP4A-205ENST00000531158 LOC100509620A0A075B734 347 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 ZNF726A6NNF4 738 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 EFCAB9A8MZ26 197 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 M0R3H8 397 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 DHHO43323 396 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 SERPINB7O75635 380 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 OCM2P0CE71 109 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 OCMP0CE72 109 aaPredicted RBP7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 OSMP13725 252 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 TNFRSF1BP20333 461 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 RAD52P43351 418 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 OR1E2P47887 323 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 CRISP1P54107 249 aa7.76□□□□□ -1.17
CHMP4A-205ENST00000531158 UGT2B15P54855 530 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms