RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 HIST1H1CP16403 213 aaKnown RBP13.25□□□□□ -0.29
CPSF1-205ENST00000531042 SLC6A6P31641 620 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 UBA52P62987 128 aaKnown RBP13.25□□□□□ -0.29
CPSF1-205ENST00000531042 SPIBQ01892 262 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 KRTAP27-1Q3LI81 207 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 ESCO2Q56NI9 601 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 ARMCX4Q5H9R4 360 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 KLF17Q5JT82 389 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-205ENST00000531042 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF420Q8TAQ5 688 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF582Q96NG8 517 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-205ENST00000531042 SLC30A2Q9BRI3 323 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 NUP50Q9UKX7 468 aa13.25□□□□□ -0.29
CPSF1-205ENST00000531042 CEACAM18A8MTB9 384 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 IQCF6A8MYZ5 107 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 HSD17B1P14061 328 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 FPR3P25089 353 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 SRP9P49458 86 aaKnown RBP13.24□□□□□ -0.29
CPSF1-205ENST00000531042 DBPQ10586 325 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-205ENST00000531042 SLC18B1Q6NT16 456 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 CFAP77Q6ZQR2 320 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 ZBTB46Q86UZ6 589 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 SIGLECL1Q8N7X8 197 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 MRI1Q9BV20 369 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 IFT27Q9BW83 186 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 C1QTNF5Q9BXJ0 243 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 WDR76Q9H967 626 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 TMEM165Q9HC07 324 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 RPRD1BQ9NQG5 326 aaKnown RBP13.24□□□□□ -0.29
CPSF1-205ENST00000531042 DDX28Q9NUL7 540 aaKnown RBP13.24□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 MAGEL2Q9UJ55 1249 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 LRCH1Q9Y2L9 728 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
CPSF1-205ENST00000531042 A0A1B0GWJ7 208 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 F5H5P2 479 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 OR10H3O60404 316 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF205O95201 554 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 CYB5R3P00387 301 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-205ENST00000531042 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 SELEP16581 610 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 CPT2P23786 658 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 NOS3P29474 1203 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 GSSP48637 474 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 ECH1Q13011 328 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF181Q2M3W8 571 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 SLC36A3Q495N2 470 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 RBMS3Q6XE24 437 aaKnown RBP13.23□□□□□ -0.29
CPSF1-205ENST00000531042 DOK3Q7L591 496 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 MOGAT3Q86VF5 341 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 LINC00346Q8IVM7 164 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 BHLHE23Q8NDY6 225 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 MCUR1Q96AQ8 359 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 ZMYND19Q96E35 227 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-205ENST00000531042 PITX2Q99697 317 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 SSBP3Q9BWW4 388 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-205ENST00000531042 HCAR1Q9BXC0 346 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 FN3KQ9H479 309 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 TMEM100Q9NV29 134 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 OR5V1Q9UGF6 321 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 CD300AQ9UGN4 299 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 CYB5R1Q9UHQ9 305 aa13.23□□□□□ -0.29
CPSF1-205ENST00000531042 IGHV3-64DA0A0J9YX35 117 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 OR6C68A6NDL8 312 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 F5H5K5 113 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 IDH3BO43837 385 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 SNX3O60493 162 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 FSTL3O95633 263 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 FABP3P05413 133 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 RRM2P31350 389 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 CD80P33681 288 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 MSX2P35548 267 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-205ENST00000531042 GGT2P36268 569 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 IFNGR2P38484 337 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 PAX2Q02962 417 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 PAX8Q06710 450 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-205ENST00000531042 AWAT1Q58HT5 328 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 KLBQ86Z14 1044 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 PGAM4Q8N0Y7 254 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 SDR9C7Q8NEX9 313 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 OR2AJ1Q8NGZ0 328 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 NSMCE2Q96MF7 247 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 ATF6BQ99941 703 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 TMEM246Q9BRR3 403 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 CDADC1Q9BWV3 514 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 IL1RAPQ9NPH3 570 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 PNRC2Q9NPJ4 139 aaKnown RBP13.22□□□□□ -0.29
CPSF1-205ENST00000531042 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 TMCC3Q9ULS5 477 aa13.22□□□□□ -0.29
CPSF1-205ENST00000531042 LRRC30A6NM36 301 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 ARPC2O15144 300 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 HLA-DPB1P04440 258 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 RPS2P15880 293 aaKnown RBP13.21□□□□□ -0.29
CPSF1-205ENST00000531042 EGR1P18146 543 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 PMELP40967 661 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms