RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PODNL1Q6PEZ8 512 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 PAQR6Q6TCH4 344 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 CBLN3Q6UW01 205 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 Q6ZT83 130 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 MTERF4Q7Z6M4 381 aaKnown RBP5.6□□□□□ -1.51
CSDE1-213ENST00000530784 SLC43A2Q8N370 569 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 TMCO5AQ8N6Q1 288 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 CCDC63Q8NA47 563 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 CLHC1Q8NHS4 586 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 ZFP90Q8TF47 636 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 CDS1Q92903 461 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 VPS33AQ96AX1 596 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 C16orf58Q96GQ5 468 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 C4orf45Q96LM5 186 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 STACQ99469 402 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 KLHDC3Q9BQ90 382 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 NAA11Q9BSU3 229 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-213ENST00000530784 HOXD1Q9GZZ0 328 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 COQ10BQ9H8M1 238 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 YAE1D1Q9NRH1 226 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 GSN-AS1Q9NRJ2 163 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 FAIMQ9NVQ4 179 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 GIN1Q9NXP7 522 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 MOB4Q9Y3A3 225 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 TMED5Q9Y3A6 229 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 FIS1Q9Y3D6 152 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 VPS13CQ709C8 3753 aa5.6□□□□□ -1.51
CSDE1-213ENST00000530784 FREM3P0C091 2139 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 IGHV3-15A0A0B4J1V0 119 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 DPRXA6NFQ7 191 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 MPTX1A8MV57 137 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 SNURFLB1AK76 121 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 TMEM114B3SHH9 223 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 SOCS3O14543 225 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 AZIN1O14977 448 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 SCAMP2O15127 329 aaKnown RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 PLIN3O60664 434 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 LYZL6O75951 148 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 HMGN2P05204 90 aaKnown RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 KRT16P08779 473 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 CPA3P15088 417 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 OR3A2P47893 321 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 CCR4P51679 360 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 CYCSP99999 105 aaKnown RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 LASP1Q14847 261 aaKnown RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 PPA1Q15181 289 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 NRF1Q16656 503 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 PGGHGQ32M88 737 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 NDUFAF6Q330K2 333 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 TMEM176BQ3YBM2 270 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 CHRFAM7AQ494W8 412 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 RFTN2Q52LD8 501 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 DCST2Q5T1A1 773 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 RNF165Q6ZSG1 346 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 BHLHA15Q7RTS1 189 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-213ENST00000530784 SSX8Q7RTT4 187 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 IFT20Q8IY31 132 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 ATP6V1C2Q8NEY4 427 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 MUCL1Q96DR8 90 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 FCRL1Q96LA6 429 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 PIGUQ9H490 435 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 BAIAP2L1Q9UHR4 511 aa5.59□□□□□ -1.51
CSDE1-213ENST00000530784 MED12Q93074 2177 aa5.59□□□□□ -1.52
CSDE1-213ENST00000530784 NPIPA5A0A0B4J1W7 369 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 TRAV24A0A0B4J272 114 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 NPIPA7E9PJI5 369 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 COPEO14579 308 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 ABCD4O14678 606 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 LSM1O15116 133 aaKnown RBP5.58□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF264O43296 627 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 IDH3BO43837 385 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 EFNA2O43921 213 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 CYTIPO60759 359 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 RAMP1O60894 148 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 LINC00032P0C843 101 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 NPIPA8P0DM63 369 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 BCKDHAP12694 445 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 GGT1P19440 569 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 COX5AP20674 150 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 GATA2P23769 480 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-213ENST00000530784 XGP55808 180 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 RASGEF1BQ0VAM2 473 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 QPRTQ15274 297 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 TOMM34Q15785 309 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-213ENST00000530784 KRBOX4Q5JUW0 171 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 TIMM23BQ5SRD1 257 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSDE1-213ENST00000530784 AGAP6Q5VW22 663 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF343Q6P1L6 599 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 C3orf33Q6P1S2 294 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 DNM1P46Q6ZS02 220 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 MED12LQ86YW9 2145 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 HIPK1Q86Z02 1210 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 PHC2Q8IXK0 858 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF100Q8IYN0 542 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 SLC37A3Q8NCC5 494 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 OR5W2Q8NH69 310 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 GPR119Q8TDV5 335 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 TMEM158Q8WZ71 300 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 OR5P2Q8WZ92 322 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms