RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 COLCA1Q6ZS62 124 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 VTCN1Q7Z7D3 282 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 TMEM86BQ8N661 226 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 CELF2-AS1Q8N7Q2 184 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 CITED1Q99966 193 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 NDEL1Q9GZM8 345 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 SYT4Q9H2B2 425 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 RERGLQ9H628 205 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 NRIP3Q9NQ35 241 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 GID8Q9NWU2 228 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 C1RLQ9NZP8 487 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 VSX1Q9NZR4 365 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-219ENST00000530495 PSMB10P40306 273 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 RELBQ01201 579 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 MAB21L1Q13394 359 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 KRR1Q13601 381 aaKnown RBP12.42□□□□□ -0.42
CAPN1-219ENST00000530495 GPR157Q5UAW9 335 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 OLFML2AQ68BL7 652 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 GPR139Q6DWJ6 353 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 RRM2BQ7LG56 351 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 BHLHE23Q8NDY6 225 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 GJC3Q8NFK1 279 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 Q8TCH9 128 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 FAM71F1Q96KD3 344 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-219ENST00000530495 COQ7Q99807 217 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 CDADC1Q9BWV3 514 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 TMEM120AQ9BXJ8 343 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 NUAK2Q9H093 628 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 HDHD2Q9H0R4 259 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 SIGLEC7Q9Y286 467 aa12.42□□□□□ -0.42
CAPN1-219ENST00000530495 LOC100653049A0A140TA62 436 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-219ENST00000530495 IMPA2O14732 288 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 TNFRSF13BO14836 293 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-219ENST00000530495 ENSAO43768 121 aaKnown RBP12.41□□□□□ -0.42
CAPN1-219ENST00000530495 KRT34O76011 436 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 NDUFB2O95178 105 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 IRF2P14316 349 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 SELEP16581 610 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 FPR3P25089 353 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 NPY4RP50391 375 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 MAPRE2Q15555 327 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 ADCK1Q86TW2 530 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 GPX7Q96SL4 187 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-219ENST00000530495 HCAR1Q9BXC0 346 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 CHIAQ9BZP6 476 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 ANKRD19PQ9H560 264 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 MARCH7Q9H992 704 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 SAR1AQ9NR31 198 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 TNFRSF19Q9NS68 423 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 TMEM5Q9Y2B1 443 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 AP3M1Q9Y2T2 418 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 LHFPL6Q9Y693 200 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 POMT1Q9Y6A1 747 aa12.41□□□□□ -0.42
CAPN1-219ENST00000530495 C22orf46C9J442 243 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 SOCS2O14508 198 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 TXNDC12O95881 172 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 LIPFP07098 398 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 MELTFP08582 738 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CD200P41217 278 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
CAPN1-219ENST00000530495 RAD23AP54725 363 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 RPL15P61313 204 aaKnown RBP12.4□□□□□ -0.42
CAPN1-219ENST00000530495 KRTAP27-1Q3LI81 207 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 IFI44LQ53G44 452 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CLEC12AQ5QGZ9 265 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 PTCHD4Q6ZW05 846 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CBLL1Q75N03 491 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 RHOUQ7L0Q8 258 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 OR11L1Q8NGX0 322 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 SLC7A13Q8TCU3 470 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 FAM46AQ96IP4 442 aaKnown RBP12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CCT8L2Q96SF2 557 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 PCGF1Q9BSM1 259 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 MMP27Q9H306 513 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 WDR76Q9H967 626 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CMTM6Q9NX76 183 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 IER3IP1Q9Y5U9 82 aa12.4□□□□□ -0.42
CAPN1-219ENST00000530495 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 ZNF879B4DU55 563 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 M0QZ24 198 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 P2RY10O00398 339 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 TIMM23O14925 209 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 ZNF682O95780 498 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 SFTPBP07988 381 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 CRABP1P29762 137 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 CFHR2P36980 270 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 COX10Q12887 443 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 GK2Q14410 553 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-219ENST00000530495 MEP1BQ16820 701 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 RUSC1-AS1Q66K80 236 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
CAPN1-219ENST00000530495 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms