RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 NKAIN3Q8N8D7 197 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 DTX3Q8N9I9 347 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 ST6GALNAC3Q8NDV1 305 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 OR13C3Q8NGS6 347 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 PAQR8Q8TEZ7 354 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 ST6GAL2Q96JF0 529 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 OR2M2Q96R28 347 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 TRAF4Q9BUZ4 470 aaPredicted RBP10.44□□□□□ -0.74
USF1-208ENST00000528768 MED28Q9H204 178 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 CENPMQ9NSP4 180 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 ASF1BQ9NVP2 202 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 OR52A1Q9UKL2 312 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 HS3ST3B1Q9Y662 390 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 CHCHD2Q9Y6H1 151 aaPredicted RBP10.44□□□□□ -0.74
USF1-208ENST00000528768 TACC2O95359 2948 aa10.44□□□□□ -0.74
USF1-208ENST00000528768 FER1L5A0AVI2 2057 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 A0A0B4J203 849 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 LOC100289279A0A1B0GTE1 492 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 TMEM269A0A1B0GVZ9 245 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 A0A1W2PPL8 197 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 AQP7P3A6NL99 342 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 SLC17A2O00624 439 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 DNPH1O43598 174 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 PRAF2O60831 178 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 CBR3O75828 277 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 KLF7O75840 302 aaPredicted RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 HPP00738 406 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 TCRBP04435 133 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 P04436 131 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 H2AFB2P0C5Z0 115 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 STOMP27105 288 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 ERP29P30040 261 aaKnown RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 GDNFP39905 211 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 RPS27P42677 84 aaKnown RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 MMP16P51512 607 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 DGCR2P98153 550 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 SSBP1Q04837 148 aaKnown RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 SSPNQ14714 243 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 ETFDHQ16134 617 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 SLC36A2Q495M3 483 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 LRFN4Q6PJG9 635 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 SPNS3Q6ZMD2 512 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 TMPPEQ6ZT21 453 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 NCCRP1Q6ZVX7 275 aaPredicted RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 BTN2A1Q7KYR7 527 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 NOXA1Q86UR1 476 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 WDSUB1Q8N9V3 476 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 OR11G2Q8NGC1 345 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 OR6M1Q8NGM8 313 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 OR56B4Q8NH76 319 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 RNF133Q8WVZ7 376 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 C11orf40Q8WZ69 217 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 UPRTQ96BW1 309 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 INTS12Q96CB8 462 aaKnown RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 POM121Q96HA1 1249 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 TMEM41AQ96HV5 264 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 LURAP1Q96LR2 239 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 FOXN4Q96NZ1 517 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 AMELYQ99218 206 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 GFI1Q99684 422 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 ZNF160Q9HCG1 818 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 MED29Q9NX70 200 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 ING1Q9UK53 422 aaPredicted RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 FBXL2Q9UKC9 423 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 FARSAQ9Y285 508 aaKnown RBP10.43□□□□□ -0.74
USF1-208ENST00000528768 N6AMT1Q9Y5N5 214 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 MPDZO75970 2070 aa10.43□□□□□ -0.74
USF1-208ENST00000528768 DIDO1Q9BTC0 2240 aaKnown RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 FBN3Q75N90 2809 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 A0A0A6YYH2 397 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 A0A1B0GTH9 108 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 A0A1B0GUH1 482 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 A6NJ64 397 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 PRSS44E7EML9 344 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 XRCC3O43542 346 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 LANCL1O43813 399 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 RBBP9O75884 186 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 ERCC1P07992 297 aaPredicted RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 HSD11B1P28845 292 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 TAS2R20P59543 309 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 CHAF1BQ13112 559 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 KLF9Q13886 244 aaPredicted RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 KCNMB1Q16558 191 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 ODF4Q2M2E3 257 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 RNASE12Q5GAN4 147 aaKnown RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 ELFN2Q5R3F8 820 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 PRAMEF20Q5VT98 475 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 GPAT4Q86UL3 456 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 ARMC10Q8N2F6 343 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 CISD2Q8N5K1 135 aaKnown RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 FDCSPQ8NFU4 85 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 ST7LQ8TDW4 575 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 CAPSLQ8WWF8 208 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 SLAMF6Q96DU3 332 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 SLC25A38Q96DW6 304 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 MESP1Q9BRJ9 268 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 MRPL13Q9BYD1 178 aaKnown RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 AKIRIN1Q9H9L7 192 aaPredicted RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 SEC61A2Q9H9S3 476 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms