RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 DAPP51397 102 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 ESRRGP62508 458 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 CDK5Q00535 292 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 EIF2B1Q14232 305 aaKnown RBP11.43□□□□□ -0.58
CAPN1-209ENST00000527469 TMEM236Q5W0B7 351 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 SPATC1Q76KD6 591 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 CXXC5Q7LFL8 322 aaKnown RBP11.43□□□□□ -0.58
CAPN1-209ENST00000527469 CPOQ8IVL8 374 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 OR6N2Q8NGY6 317 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 ZNRF4Q8WWF5 429 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 MAP6Q96JE9 813 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 DIRC2Q96SL1 478 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 CHODLQ9H9P2 273 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 SLC25A19Q9HC21 320 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 ZDHHC8Q9ULC8 765 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 ORC6Q9Y5N6 252 aa11.43□□□□□ -0.58
CAPN1-209ENST00000527469 SAC3D1A6NKF1 404 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 M0R135 149 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 PRODHO43272 600 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 PPIHO43447 177 aaKnown RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 CDC14BO60729 498 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 RAC2P15153 192 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 SELEP16581 610 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 ACHEP22303 614 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 GIFP27352 417 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 HSD11B1P28845 292 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 CHN2P52757 468 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 MRPS11P82912 194 aaKnown RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 PSG7Q13046 419 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 TMEM249Q2WGJ8 235 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 TEX30Q5JUR7 227 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 FAM209AQ5JX71 171 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 SHFQ7M4L6 423 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 DPY19L4Q7Z388 723 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 GTF3AQ92664 365 aaKnown RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 SLAMF6Q96DU3 332 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 ZMYND19Q96E35 227 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF799Q96GE5 643 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF582Q96NG8 517 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 BPESC1Q9GZL8 116 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 GABARAPL1Q9H0R8 117 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 POFUT1Q9H488 388 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 MSL2Q9HCI7 577 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 NKIRAS2Q9NYR9 191 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 H2AFY2Q9P0M6 372 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
CAPN1-209ENST00000527469 OAZ3Q9UMX2 235 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 N6AMT1Q9Y5N5 214 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 ABCA1O95477 2261 aa11.42□□□□□ -0.58
CAPN1-209ENST00000527469 SONP18583 2426 aaKnown RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 ZSCAN5BA6NJL1 495 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF878C9JN71 531 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 MITFO75030 526 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 NCR1O76036 304 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 ACSM4P0C7M7 580 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 KITLGP21583 273 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 MMP15P51511 669 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 TNFAIP6P98066 277 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 HLXQ14774 488 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 PTGES3Q15185 160 aaKnown RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 HFEQ30201 348 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 SLC35D3Q5M8T2 416 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 LCN1P1Q5VSP4 162 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 USP51Q70EK9 711 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 MRPL21Q7Z2W9 205 aaKnown RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 OR5AS1Q8N127 324 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF283Q8N7M2 679 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 OR2Z1Q8NG97 314 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 HAVCR1Q96D42 359 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 RBM4BQ9BQ04 359 aaKnown RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 OSBPL10Q9BXB5 764 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 RIBC2Q9H4K1 309 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 SP140LQ9H930 580 aa11.41□□□□□ -0.58
CAPN1-209ENST00000527469 PNRC2Q9NPJ4 139 aaKnown RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 DDX28Q9NUL7 540 aaKnown RBP11.41□□□□□ -0.58
CAPN1-209ENST00000527469 VWC2LB2RUY7 222 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 CD5LO43866 347 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 IGHV1-46P01743 117 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 APOC1P02654 83 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 COL8A2P25067 703 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 NAA10P41227 235 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-209ENST00000527469 GZMKP49863 264 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 PRKXP51817 358 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 TMEM33P57088 247 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 GRB2P62993 217 aaKnown RBP11.4□□□□□ -0.58
CAPN1-209ENST00000527469 APOFQ13790 326 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 LINC01590Q5TEZ4 76 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 KDM4DQ6B0I6 523 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 CYB5R2Q6BCY4 276 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 OR2T2Q6IF00 324 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 DRAM2Q6UX65 266 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 FBXW12Q6X9E4 464 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 PGAP1Q75T13 922 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms