RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MOKQ9UQ07 419 aa6.64□□□□□ -1.35
CTNND1-216ENST00000527467 OR51B4Q9Y5P0 310 aa6.64□□□□□ -1.35
CTNND1-216ENST00000527467 KDM4EB2RXH2 506 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 CORTO00230 105 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 OR2T7P0C7T2 308 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 SHC1P29353 583 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 OR1D4P47884 311 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 RPS21P63220 83 aaKnown RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 IL24Q13007 206 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 CSRP2Q16527 193 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 KHDC1LQ5JSQ8 128 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ENTPD8Q5MY95 495 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 LEMD1Q68G75 181 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 CDC20BQ86Y33 519 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ADAMTS17Q8TE56 1095 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 KHSRPQ92945 711 aaKnown RBP eCLIP6.63□□□□□ -1.354e-7■■□□□ 12.3
CTNND1-216ENST00000527467 PINX1Q96BK5 328 aaKnown RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 WFIKKN1Q96NZ8 548 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 DMRTA2Q96SC8 542 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 NAA50Q9GZZ1 169 aaKnown RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 GPR55Q9Y2T6 319 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 DLG5Q8TDM6 1919 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 OR52A4PA6NMU1 304 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ISLRO14498 428 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 PRAMEF4O60810 478 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 OR8G3PP0DMU2 310 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ITGB7P26010 798 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 PMP22Q01453 160 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ASAH1Q13510 395 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 NSDHLQ15738 373 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 MSS51Q4VC12 460 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ABHD17BQ5VST6 288 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 DPPA3Q6W0C5 159 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 CMTM4Q8IZR5 234 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 GHSRQ92847 366 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 SIGLEC10Q96LC7 697 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 MOGAT1Q96PD6 335 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 GSTO2Q9H4Y5 243 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 LANCL2Q9NS86 450 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 TRAPPC4Q9Y296 219 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 FLVCR1Q9Y5Y0 555 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 MYBPHLA2RUH7 354 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 BCL2L11O43521 198 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 SSSCA1O60232 199 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 UNGP13051 313 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 HIST1H1CP16403 213 aaKnown RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 BSGP35613 385 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF93P35789 620 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-216ENST00000527467 EDDM3BP56851 147 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 FUT2Q10981 343 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 MFAP5Q13361 173 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 TMEM241Q24JQ0 296 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 RPEL1Q2QD12 228 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 PIP5KL1Q5T9C9 394 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 IRF2BP1Q8IU81 584 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF383Q8NA42 475 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 SLC26A10Q8NG04 563 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 OR10A7Q8NGE5 316 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 TMEM230Q96A57 120 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 PKIBQ9C010 78 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 AAMDCQ9H7C9 122 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 MSL2Q9HCI7 577 aa6.63□□□□□ -1.35
CTNND1-216ENST00000527467 LOC107984156A0A0G2JMH3 177 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 DUXBA0A1W2PPF3 345 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 TIMM8AO60220 97 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 KLF7O75840 302 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 CD82P27701 267 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 PIGPP57054 158 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 PAFAH1B3Q15102 231 aaKnown RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 GABRA6Q16445 453 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 STPG1Q5TH74 334 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 TXNDC8Q6A555 127 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 PODNL1Q6PEZ8 512 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ARL17AQ8IVW1 177 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 NAXDQ8IW45 347 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ARHGEF39Q8N4T4 335 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 DEFB119Q8N690 84 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OR5AU1Q8NGC0 362 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF689Q96CS4 500 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 MUCL1Q96DR8 90 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 MMP17Q9ULZ9 603 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 FAM183AA6NL82 134 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 GABRR3A8MPY1 467 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 FOXE1O00358 373 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 CA2P00918 260 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 SHC2P98077 582 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OR4D1Q15615 310 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ZNF141Q15928 474 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 FAM78AQ5JUQ0 283 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 LY6G5CQ5SRR4 150 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 C22orf39Q6P5X5 142 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 ANKRD16Q6P6B7 361 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 VRK2Q86Y07 508 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 DND1Q8IYX4 353 aaKnown RBP6.62□□□□□ -1.35
CTNND1-216ENST00000527467 FAM24BQ8N5W8 94 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 OR5D13Q8NGL4 314 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 HRASLS5Q96KN8 279 aa6.62□□□□□ -1.35
CTNND1-216ENST00000527467 KIAA1456Q9P272 454 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms