RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MEGF11A6BM72 1044 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 C17orf51A8MQB3 221 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MEF2DQ14814 521 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 INPP5JQ15735 1006 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 TOMM34Q15785 309 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 GUCA2BQ16661 112 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 VWA2Q5GFL6 755 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 SHEQ5VZ18 495 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 FDX2Q6P4F2 183 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 FJX1Q86VR8 437 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF321PQ8N8H1 164 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CHRDQ9H2X0 955 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 TREM1Q9NP99 234 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 HHLA2Q9UM44 414 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MPZL1O95297 269 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 GFERP55789 205 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM71Q6P5X7 295 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CORO6Q6QEF8 472 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MAMDC2Q7Z304 686 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CBLN2Q8IUK8 224 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 SPAG16Q8N0X2 631 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 C19orf47Q8N9M1 422 aaKnown RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 FOXRED1Q96CU9 486 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CENPMQ9NSP4 180 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CYB5R1Q9UHQ9 305 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CEP250Q9BV73 2442 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 C9orf170A2RU37 121 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 STK17BO94768 372 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 PGAM2P15259 253 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CTLA4P16410 223 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 ZBTB25P24278 435 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 RPL27P61353 136 aaKnown RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 UQCC3Q6UW78 93 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 SLC25A42Q86VD7 318 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 NUDCD2Q8WVJ2 157 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 DCUN1D4Q92564 292 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MICU1Q9BPX6 476 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 NUDT9Q9BW91 350 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 NRSN2Q9GZP1 204 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MYOZ1Q9NP98 299 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MRPL22Q9NWU5 206 aaKnown RBP11.2□□□□□ -0.62
CAPN1-208ENST00000527323 NDRG3Q9UGV2 375 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 MKL2Q9ULH7 1088 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 KIF26BQ2KJY2 2108 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 SULT2B1O00204 365 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 EIF1AYO14602 144 aaKnown RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 CD74P04233 296 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 RABIFP47224 123 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 EIF1AXP47813 144 aaKnown RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 SCRN3Q0VDG4 424 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 AIMP2Q13155 320 aaKnown RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 SLC22A6Q4U2R8 563 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 TEX30Q5JUR7 227 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 LDLRAD3Q86YD5 345 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 KDM8Q8N371 416 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 FAM131CQ96AQ9 280 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF629Q9UEG4 869 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 COA3Q9Y2R0 106 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 TRAV36DV7A0A075B6V5 113 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 A0A0B4J2A0 478 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 FAM221BA6H8Z2 402 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF98A6NK75 572 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 GDF9O60383 454 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 LMX1BO60663 402 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 MTRF1O75570 445 aaKnown RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF823P16415 610 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 INSM1Q01101 510 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 FNDC7Q5VTL7 733 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 CATSPERDQ86XM0 798 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 ARMC10Q8N2F6 343 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 OR4D6Q8NGJ1 314 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 ASB12Q8WXK4 309 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM231Q9H6L2 316 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 CHMP1AQ9HD42 196 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-208ENST00000527323 SHPKQ9UHJ6 478 aa11.19□□□□□ -0.62
CAPN1-208ENST00000527323 LOC107986453A0A1B0GWG9 222 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 RAB19A4D1S5 217 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 ICOSLGO75144 302 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF217O75362 1048 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 IL33O95760 270 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-208ENST00000527323 BGLAPP02818 100 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 CFPP27918 469 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 HRH1P35367 487 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 CD96P40200 585 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 CLDN6P56747 220 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF117Q03924 483 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 LINC00346Q8IVM7 164 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 ADAD2Q8NCV1 583 aaKnown RBP11.18□□□□□ -0.62
CAPN1-208ENST00000527323 TGM7Q96PF1 710 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 RTN4RQ9BZR6 473 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 GMEB2Q9UKD1 530 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms